Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00290 ATGGTGTTCGAGTTGAGCTCCCTTTGTTACTTTGATGACAGATTATCGATGGACACAAGTTGCACAAGAACAGCTTTAAGAACCATCTTCTTCCTCCTCCTGTGGTGCTGCCTCTCTTTCATTTCCATGGCAGACGTTATTTATCGTCCCACTGACCTCTTTAGCATCAGCTGTGGCTCATCCACCAACTTCTCCACTCCCGACACTCGGAATTGGACTTCAGACAATCACTTTCTCTCTCCAACCAACCTCTCAGTCGCTGCTCCTTCACTCACACCATCTACCATAGCGGGTCCCTACACCCATGCTCGTCTCTCTCACTCTCCATTCACTTACTCATTCCCTCTCACACCAGGCCCCAAGTTCATTCGTCTCTTCTTCTACTCTACTTCATACCAAAACTTCCCTCGCTCCCTAGCCTCTTTCTCAGTCCAAGCAGGCCCCTACACCCTCCTTCAACATTTCAATGCTTCACTCAACGCCGATGTTGATGATGATCCTAGCCACCCTGACATCTTGTTCAAAGAGTATTGTATCAACCTCCAAGATGGTGACAAGCTCAACATAACCTTCCTTCCTAGCACCACAGATTCCTACGCTTTCATCAACGGGATCGAGATTGTTTCGATGCCCCCTTATCTCTACTACACCGATCCTGACGACTCCACAGAGCAGCCGCAATTTGTTGGCATCATGACCCCATATGTCGTTGAGAACAAGTTTGCTCTTGAGACCATGTACAGGTTAAAAGCTGGTGAACATACAATCTCCTCCTCTGAGGACACGGGAATGTTCAGGACTTGGGATGCCGATGGCAAGTACCTAGACACTCAAAGTGAAGAATCTATTGAGTTTAAGAGTACAACTAATCTGAGCTTCACTAAGAAGATTCCTAACTACACGGCACCAGACCAAGTATTCCGATCAGTAAGGAATATGGGAAGAGATGCCTCTATCAACATGAGGAACAACATCACTTGGCAACTTACAGTTGATTCCGGCTTCACCTACTTGCTAAGGTTATACTTTTGTGAGCTTAACCCGAGAGTTCACGAGGCTGGTTTCCTGAGATTCTTCATCTTCATACATGATCAGTTGGCTACCGATTGGGCAGACGTTTTCATGTGGACGAAACAGTGGGGTGTGCCCGTGGTTAAAGAGTATGTAGTTATCATCTCAGAGAATCCGAAAAAAGTTAACCTTTCGCTAAAAATGCATCCTCACCCTAAAAGCATTATCCAGGACGCACAAATAAATGCAATTGAAATCTTCAAAATCAGCAATTATAGAGGTAGTCTCGCTGGACCAAATCAGGACCCTCCTCTACAAACCGCAGTGGTATCCCGTCAAGGGTCAAACAATAAAAACGGAGCCTCCAAGAAAACCCTCGCCGCCGTGACAGGGACAGTTTTCGGTGTCCTTTTCCTCTCTTTTATTGTCGCTTTCTTCTTCGTTAAACGCAAGAAAAACATCTCCGTTGAAAGTAAGAAAGAGGAAAATTCTCGCCGGGATGGGTCATCACCACTACCAACCAACCTCTGTCGTCACTTCTCAATCTCAGAAATCATTGCCGCAACCAATAACTTCGACGAACTCTTCGTCGTTGGAGTGGGAGGCTTTGGCAACGTGTACAAAGGCTACATAGACGATTCAACACCTGTGGCAATCAAAAGGCTCAAACCGGGTTCTCAGCAAGGTCTGAACGAGTTCATGAACGAGATCGAAATGCTCTCTCAACTTCGACATCTCCATCTTGTTTCCCTCATCGGCTACTGCTACGAGAGCAACGAGATGATCCTCGTTTACGATTTCATGGATCGTGGAGCCCTCCGTGATCATCTCTACGACACCGATAACCCTTTGCTTTCATGGAAGCAAAGACTTCAGATATGCATCGGGGCGGCACGAGGACTGCATTATCTGCATACAGGTGCGAAACAGATGATCATTCACCGTGACGTGAAGAGCACAAACATCTTGTTGGATGAAAAATGGGTGGCGAAAGTTTCAGACTTCGGATTGTCTCGAATTGGGCCCACAGGTTCTTCAATGACCCATGTGAGCACTCAGGTGAAGGGCAGTGTTGGGTATTTAGATCCGGAGTATTACAAACGACAGCGTTTGACGGAGAAGTCGGACTTGTACTCGTACGGAGTGGTGCTCTTAGAGGTATTGTGTGGGAGGCAGCCTTTGCTCCGAACGGTGGAGAAGCAACAGGTGTCCCTCGTGGACTGGGCGAAGCATCGGTATGAGAAGGGATCTCTGAGTGAGATTGTGGATCCAGCACTGAAGGGTCAGATAGCACCTCTCTGTTTGCGCAAATTTAGTGAGGTTGCGATGAGCTGTTTGCTTGAGAATGGGACTCAGCGACCTTCCATGAACGACGTCGTTGGGGTGTTAGAGTTTGTTCTGCAGCTTCAGCTTCAGGAGGACAGTGCTCATGGTGATGTAGTGTGGGAGAGTGGCAGGGACTATGAAGGCAGTACAACTGAGGAGATGTTTAGCAGTTCCCATAGTAATAGCAATGTATTGAACACTACAAGCTTCGGGAATAAGGAATCTGATAGGTTAATCAATGAGAATGTTTTTTCTGAGCTTAAGGATCCAAAGGGACGCTGA 2619 0.47 MVFELSSLCYFDDRLSMDTSCTRTALRTIFFLLLWCCLSFISMADVIYRPTDLFSISCGSSTNFSTPDTRNWTSDNHFLSPTNLSVAAPSLTPSTIAGPYTHARLSHSPFTYSFPLTPGPKFIRLFFYSTSYQNFPRSLASFSVQAGPYTLLQHFNASLNADVDDDPSHPDILFKEYCINLQDGDKLNITFLPSTTDSYAFINGIEIVSMPPYLYYTDPDDSTEQPQFVGIMTPYVVENKFALETMYRLKAGEHTISSSEDTGMFRTWDADGKYLDTQSEESIEFKSTTNLSFTKKIPNYTAPDQVFRSVRNMGRDASINMRNNITWQLTVDSGFTYLLRLYFCELNPRVHEAGFLRFFIFIHDQLATDWADVFMWTKQWGVPVVKEYVVIISENPKKVNLSLKMHPHPKSIIQDAQINAIEIFKISNYRGSLAGPNQDPPLQTAVVSRQGSNNKNGASKKTLAAVTGTVFGVLFLSFIVAFFFVKRKKNISVESKKEENSRRDGSSPLPTNLCRHFSISEIIAATNNFDELFVVGVGGFGNVYKGYIDDSTPVAIKRLKPGSQQGLNEFMNEIEMLSQLRHLHLVSLIGYCYESNEMILVYDFMDRGALRDHLYDTDNPLLSWKQRLQICIGAARGLHYLHTGAKQMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPTGSSMTHVSTQVKGSVGYLDPEYYKRQRLTEKSDLYSYGVVLLEVLCGRQPLLRTVEKQQVSLVDWAKHRYEKGSLSEIVDPALKGQIAPLCLRKFSEVAMSCLLENGTQRPSMNDVVGVLEFVLQLQLQEDSAHGDVVWESGRDYEGSTTEEMFSSSHSNSNVLNTTSFGNKESDRLINENVFSELKDPKGR 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00290 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Vian2g00290 872 SUPERFAMILY Protein kinase-like (PK-like) 503 803 IPR011009 -
Vian2g00290 872 FunFam FERONIA receptor-like kinase 53 211 - -
Vian2g00290 872 CDD STKc_IRAK 544 801 - -
Vian2g00290 872 FunFam FERONIA receptor-like kinase 241 427 - -
Vian2g00290 872 FunFam receptor-like protein kinase FERONIA 489 604 - -
Vian2g00290 872 ProSiteProfiles Protein kinase domain profile. 529 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00290 872 PANTHER OS03G0124300 PROTEIN-RELATED 29 490 IPR046957 GO:0004672
Vian2g00290 872 Gene3D Phosphorylase Kinase; domain 1 488 604 - -
Vian2g00290 872 Pfam Protein tyrosine and serine/threonine kinase 535 798 IPR001245 GO:0004672|GO:0006468
Vian2g00290 872 Gene3D - 52 210 - -
Vian2g00290 872 Gene3D - 241 428 - -
Vian2g00290 872 Pfam Malectin-like domain 56 426 IPR024788 -
Vian2g00290 872 SMART serkin_6 529 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00290 872 ProSitePatterns Protein kinases ATP-binding region signature. 535 557 IPR017441 GO:0005524
Vian2g00290 872 Gene3D Transferase(Phosphotransferase) domain 1 605 819 - -
Vian2g00290 872 FunFam Receptor-like protein kinase FERONIA 605 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00290 Vian-Chr2 3091695 3094313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00290 39 872 Receptor kinase-like Gene Family AT3G51550 45.067 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vian2g00290 Malectin_like 1.6e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00290 - - vun:114186088 1224.15