Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00286 ATGTTTCTCAAATGTCTGGGCTTCAGCTGTTCCAAGAACACATCTCAGAGAAATTATCCAACAATTATAGAAGAGTTGAGCCTTCAATTTTCTCTCTCCCATCTTACCAAATCAACCAACAACTTTGATCCAAAAAGGGTAGTTGGACGTGATTCATTTTGGGAAGTATATGAAGCTTCTCTCCAACATAGACACGGCTCTCCTTATACACTCACAATAAAAAGATTTAATGTAAAATACAATGGCAACTTCAAGAATGAAATAGAGTTGCTCTGCCAGCTTCGTCACCCTAATATCGTCTCTCTTGTAGGATTCTGCAACCACAAGAAAGAGAAAATTATTGTGTACGAATACCTGTCCAATGAATCTCTAGATCGACAACTTGAAAGAGGGGAACTTTCGTGGAAGAAAAGACTAGAGATTTGCATAGGAGCAGCACGTGGACTGCACTATCTTCACGCTGGAGCCAAGCGCACCATCATTCATCGCGACATCAAACCTAGCAACATTCTTTTGGATGCAAACATGGAGCCAAAGATTTCAGGTTTTGATCTTAGCGTACAGGGACAGCGTTTTATGTCAAAGCCAAAGCCAATTAAAGTAGATTCTGTTGCGGGTACTATTGGCTACGTGGCTGCGGAGCAATTTATGAACCTGACCATCACAGATAAAACCGATGTTTATTCATTTGGTATGGTTCTATTCGAAGTTGTGAGTGGAAAGACATATATGAGTTTAATAGAAGAAGAGGAAAAGTTTGAAATGCCGGTTGAAGAGAAAGTTGATCCGAAAATCAAAGGAAAGATTACACCTGAGTCTTGGCAAGTCTTTATAGATATCGTGCAAGGATGCTTGAAATACGAAGCAGATGAGCGACCAACAATGGGTGAGGTAGAGGTGCAACTTGAGCATGCTCTGTTGTTGCAGGAACAAGCAGATATCACAAACATCCATGGTGATTATGTTTTATTGTCTAAAACCATTATTAACCTAAAGGCTAGTTAG 1005 0.4 MFLKCLGFSCSKNTSQRNYPTIIEELSLQFSLSHLTKSTNNFDPKRVVGRDSFWEVYEASLQHRHGSPYTLTIKRFNVKYNGNFKNEIELLCQLRHPNIVSLVGFCNHKKEKIIVYEYLSNESLDRQLERGELSWKKRLEICIGAARGLHYLHAGAKRTIIHRDIKPSNILLDANMEPKISGFDLSVQGQRFMSKPKPIKVDSVAGTIGYVAAEQFMNLTITDKTDVYSFGMVLFEVVSGKTYMSLIEEEEKFEMPVEEKVDPKIKGKITPESWQVFIDIVQGCLKYEADERPTMGEVEVQLEHALLLQEQADITNIHGDYVLLSKTIINLKAS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00286 334 SMART serkin_6 42 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00286 334 FunFam Receptor-like protein kinase ANXUR2 119 324 - -
Vian2g00286 334 Gene3D Phosphorylase Kinase; domain 1 6 118 - -
Vian2g00286 334 Gene3D Transferase(Phosphotransferase) domain 1 119 321 - -
Vian2g00286 334 PANTHER OS07G0166700 PROTEIN 29 309 IPR045272 GO:0004714|GO:0006468
Vian2g00286 334 FunFam Receptor-like protein kinase ANXUR2 7 118 - -
Vian2g00286 334 Pfam Protein tyrosine and serine/threonine kinase 45 301 IPR001245 GO:0004672|GO:0006468
Vian2g00286 334 SUPERFAMILY Protein kinase-like (PK-like) 17 302 IPR011009 -
Vian2g00286 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Vian2g00286 334 ProSiteProfiles Protein kinase domain profile. 42 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00286 Vian-Chr2 2991324 2992716 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00286 9 313 Receptor kinase-like Gene Family AT3G51550 39.319 3.18e-64 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vian2g00286 PK_Tyr_Ser-Thr 8.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00286 - - vum:124832507 501.516