Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian2g00285 | ATGGAAGAAAAGGTTGGAGATCTGCATAGGAGCAGCGCGTGGACTGCACTATCTCACGCTGGAGCAAAGCGCACCATCATTCATCGTAATATCAATCCTAGCAACATTCTTTTGGATGGGAACATGGAGCCAAGGCTTGCAGATTTTGGCCTTAGCGTACAGGGACAGCGTTTTATGTCAAAGCCAAAGCCGATTAAAGTAGATTCTGTTGTTGGTACTTTTGGCTACCTGGCTAAGGAGCATCTCGTGGACCTTACCATCACGGATAAAACTGATGTTTACTCATTTGGTATGGTTCTATTAGAAGTTGTGTGTGGAGGGTCATATGTGAAAAGGGTAACAGAAAGAGAATTTCTGAGGCCTGTTGAAGAGAAACTTCATCCGAATATCGAAGGAAAGATTGCACCTGACTGTTGGCAAGTCTTTGTAGAAATCATTCAAGGATGCGTAAAATATGAAGCAGATGAGCGACCAACGATGGGTGAAGTAGAGATGCAACTTGAGCATGCTTTGTTGTTGCAGGAACAAGCAGATACAGCAAATACCAATGTTGAATATACCTTATTGTCCAAAACCATTATTAATTAG | 588 | 0.4235 | MEEKVGDLHRSSAWTALSHAGAKRTIIHRNINPSNILLDGNMEPRLADFGLSVQGQRFMSKPKPIKVDSVVGTFGYLAKEHLVDLTITDKTDVYSFGMVLLEVVCGGSYVKRVTEREFLRPVEEKLHPNIEGKIAPDCWQVFVEIIQGCVKYEADERPTMGEVEMQLEHALLLQEQADTANTNVEYTLLSKTIIN | 195 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian2g00285 | 195 | ProSiteProfiles | Protein kinase domain profile. | 1 | 172 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian2g00285 | 195 | SMART | serkin_6 | 1 | 172 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian2g00285 | 195 | Pfam | Protein tyrosine and serine/threonine kinase | 23 | 167 | IPR001245 | GO:0004672|GO:0006468 | |
Vian2g00285 | 195 | PANTHER | OS07G0166700 PROTEIN | 19 | 174 | IPR045272 | GO:0004714|GO:0006468 | |
Vian2g00285 | 195 | Gene3D | Transferase(Phosphotransferase) domain 1 | 12 | 191 | - | - | |
Vian2g00285 | 195 | SUPERFAMILY | Protein kinase-like (PK-like) | 16 | 175 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian2g00285 | Vian-Chr2 | 2982229 | 2982891 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian2g00285 | 19 | 178 | Receptor kinase-like Gene Family | AT3G51550 | 38.728 | 4.33e-30 | 114 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CR4L | Vian2g00285 | PK_Tyr_Ser-Thr | 1.7e-20 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian2g00285 | - | - | gmx:100812131 | 265.003 |