Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00285 ATGGAAGAAAAGGTTGGAGATCTGCATAGGAGCAGCGCGTGGACTGCACTATCTCACGCTGGAGCAAAGCGCACCATCATTCATCGTAATATCAATCCTAGCAACATTCTTTTGGATGGGAACATGGAGCCAAGGCTTGCAGATTTTGGCCTTAGCGTACAGGGACAGCGTTTTATGTCAAAGCCAAAGCCGATTAAAGTAGATTCTGTTGTTGGTACTTTTGGCTACCTGGCTAAGGAGCATCTCGTGGACCTTACCATCACGGATAAAACTGATGTTTACTCATTTGGTATGGTTCTATTAGAAGTTGTGTGTGGAGGGTCATATGTGAAAAGGGTAACAGAAAGAGAATTTCTGAGGCCTGTTGAAGAGAAACTTCATCCGAATATCGAAGGAAAGATTGCACCTGACTGTTGGCAAGTCTTTGTAGAAATCATTCAAGGATGCGTAAAATATGAAGCAGATGAGCGACCAACGATGGGTGAAGTAGAGATGCAACTTGAGCATGCTTTGTTGTTGCAGGAACAAGCAGATACAGCAAATACCAATGTTGAATATACCTTATTGTCCAAAACCATTATTAATTAG 588 0.4235 MEEKVGDLHRSSAWTALSHAGAKRTIIHRNINPSNILLDGNMEPRLADFGLSVQGQRFMSKPKPIKVDSVVGTFGYLAKEHLVDLTITDKTDVYSFGMVLLEVVCGGSYVKRVTEREFLRPVEEKLHPNIEGKIAPDCWQVFVEIIQGCVKYEADERPTMGEVEMQLEHALLLQEQADTANTNVEYTLLSKTIIN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00285 195 ProSiteProfiles Protein kinase domain profile. 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00285 195 SMART serkin_6 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00285 195 Pfam Protein tyrosine and serine/threonine kinase 23 167 IPR001245 GO:0004672|GO:0006468
Vian2g00285 195 PANTHER OS07G0166700 PROTEIN 19 174 IPR045272 GO:0004714|GO:0006468
Vian2g00285 195 Gene3D Transferase(Phosphotransferase) domain 1 12 191 - -
Vian2g00285 195 SUPERFAMILY Protein kinase-like (PK-like) 16 175 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00285 Vian-Chr2 2982229 2982891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00285 19 178 Receptor kinase-like Gene Family AT3G51550 38.728 4.33e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Vian2g00285 PK_Tyr_Ser-Thr 1.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00285 - - gmx:100812131 265.003