Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00284 ATGCTTCCTAAATGTTTGGGTTTCTGCGGTCGGAAACAGTATCCAACCGTAATACAAGAGTTGTGCCATGAATTTTCTCTCTCTGATATTGAGAAATCGACAAACAACTTTGACCGTAAGAGAATAATTGCAATTTCAAGCTTTGGTGGTAAAGTATACGAAGGTTGCCTCCAACACCACGATGGTTCTCAATATTCAGTTGCAATAACGCGATTGAATGAAGATGATGAAGACATTGAAGGACGCGACTGGTTTGAGAAAGAAATAGAGTTGCTCTGTCAGTTTCGTCACCCTAATTGTGTGTCTCTTATAGGATTCTGCAACAACAAGAAAGAGAAGATTATTGTGCACGAGTACATGTCCAATGGATCTCTAGATCAACACATAGTACGAGGTGGGGATACAGAAGCACTTTCATGGAGGAAAAGGATAGAGATATGCATAGGAGTAGCTCGTGGACTACACTACCTTCACGCCGGACTCAAGCGCACCATTATTCACCGTGACGTTTGTCTCAGAAACATTCTTCTGGACAGCCACATGGAGCCAAAACTAGCATCTTTTAATCATTGA 573 0.4171 MLPKCLGFCGRKQYPTVIQELCHEFSLSDIEKSTNNFDRKRIIAISSFGGKVYEGCLQHHDGSQYSVAITRLNEDDEDIEGRDWFEKEIELLCQFRHPNCVSLIGFCNNKKEKIIVHEYMSNGSLDQHIVRGGDTEALSWRKRIEICIGVARGLHYLHAGLKRTIIHRDVCLRNILLDSHMEPKLASFNH 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00284 190 ProSiteProfiles Protein kinase domain profile. 37 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00284 190 FunFam Receptor-like protein kinase ANXUR2 6 119 - -
Vian2g00284 190 PANTHER OS07G0166700 PROTEIN 21 189 IPR045272 GO:0004714|GO:0006468
Vian2g00284 190 FunFam Os07g0541700 protein 120 190 - -
Vian2g00284 190 Gene3D Phosphorylase Kinase; domain 1 6 119 - -
Vian2g00284 190 SUPERFAMILY Protein kinase-like (PK-like) 14 188 IPR011009 -
Vian2g00284 190 Gene3D Transferase(Phosphotransferase) domain 1 120 190 - -
Vian2g00284 190 Pfam Protein tyrosine and serine/threonine kinase 50 188 IPR001245 GO:0004672|GO:0006468
Vian2g00284 190 SMART tyrkin_6 42 190 IPR020635 GO:0004713|GO:0006468
Vian2g00284 190 ProSitePatterns Tyrosine protein kinases specific active-site signature. 165 177 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00284 Vian-Chr2 2973580 2974152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00284 21 188 Receptor kinase-like Gene Family AT3G51550 45.833 2.19e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vian2g00284 PK_Tyr_Ser-Thr 1.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00284 - - pvu:PHAVU_008G029700g 232.646