Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00279 ATGAGGCTTGTCATATCAGCTGCATGTGTTCTAGTGCTATTCTCTTGTGCAGCTGCGTATGATCCTTTGGATCCAAATGGAAACGTAACGATCAAATGGGATGTTGTGTCTTGGACACCAGATGGCTATGTAGCAGTGGTAACGATGAGCAATTTCCAAATGTTTCGGCACATCATGAATCCCGGGTGGACCTTGTCGTGGACGTGGGCAAAGAAGGAAGTAATATGGTCCATGGTAGGAGCTCAAACAACAGAGCAAGGAGACTGCTCTAAGTTCAAAGGCAATGTACCTCACTGCTGCAAGAAAACTCCCACAGTTGTAGACTTGCTCCCTGGTGTACCTTACAATCAACAATTCTCAAACTGTTGTAAGGGTGGAGTGGTGGCAGCATGGGGCCAAGACCCTTCAGCAGCAGTTTCATCCTTCCAAGTCAGTATTGGGTTAGCCGGCACTTCAAACAAGACTGTTAAACTTCCCAAGAACTTCACTCTCTTGGGTCCAGGACCAGGTTACACTTGTGGTCCTGCCAAGGTTGTTCCTTCCACCGTTTTCCTTACACCTGACAAGCGCCGCAAGACTCAAGCACTGATGACATGGAATGTTACTTGCACATACTCACAATTTCTGGCAAGAAAGAACCCAGGTTGCTGTGTATCTTTGTCATCCTTTTACAACGAGACCATTACCCCTTGTCCCTCTTGTGCATGTGGATGCCAGAACAGGAGGAACTGTGTCAAGAGTGACTCTAAACGTATCAACATGGTGGGGATTCACACTCCAAAGAAAGACAATGAACCATTGCTACAGTGCACTCATCATATGTGCCCAATAAGAGTACACTGGCACGTGAAGCTCAACTACAAGGACTATTGGAGAGTCAAGGTTGCCGTAACAAATTTCAACTACAGGATGAACTACTCCCTCTGGACTCTTGCTGTTCAGCATCCAAATCTTAACAATGTCACCCAAGTTTTCAGCTTTGATTACAAGCCTCTACTTCCATACGAGTCCATAAATGATACTGGTATGTTCTATGGAATGAAATACTTTAACGATCTATTGATGGAAGCTGGACCGACTGGGAATGTTCAATCAGAAATTCTTCTTCAGAAAGATAAGGATACATTCACTCTCAAGCAGGGGTGGGCATTTCCTCGCAAGGTCTACTTTAATGGCGAAGAATGCATGCTGCCACCGCCAGATACCTACCCGATCCTTCCTAACTCTGCCCCTTTGAACCTATTGAACTTCCCAAAATTCATATTCACAATGCTTGTCATGCTAGCTGTTTTGTGA 1296 0.4522 MRLVISAACVLVLFSCAAAYDPLDPNGNVTIKWDVVSWTPDGYVAVVTMSNFQMFRHIMNPGWTLSWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSAAVSSFQVSIGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDKRRKTQALMTWNVTCTYSQFLARKNPGCCVSLSSFYNETITPCPSCACGCQNRRNCVKSDSKRINMVGIHTPKKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKVAVTNFNYRMNYSLWTLAVQHPNLNNVTQVFSFDYKPLLPYESINDTGMFYGMKYFNDLLMEAGPTGNVQSEILLQKDKDTFTLKQGWAFPRKVYFNGEECMLPPPDTYPILPNSAPLNLLNFPKFIFTMLVMLAVL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00279 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0016020
Vian2g00279 431 PANTHER PROTEIN COBRA 8 424 IPR006918 GO:0010215|GO:0016020
Vian2g00279 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
Vian2g00279 431 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00279 Vian-Chr2 2941022 2942919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00279 1 431 COBRA Gene Family AT3G29810 63.182 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00279 - - gmx:100783410 888.256