Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00274 ATGTTTCTGAATTGTTTGGGCATGTGCTGTTCGAAGCCCACAACAAATACAAATTCATCTCGGAGACAGTTTCCATCGTTAATAGAAGAACTGTGCCATCAATTTTCTCTCATCGATATCAGGAAAGCCACCGATAACTTTGATACAAACAGAGTAGTAGGACGTGGATTATTTAGTGAAGTATATAAAGGCTGTTTACAGCATAATGGGGCTTCTGATTACACGGTCGCAATAAAGCGATTTAATGATCAAGGATGGGAAGCGTTCAACACGGAAATAGAATTGTTATGTCAGCTTCATCACCCCAGATGTGTGTCTCTTATAGGATTCTGCAACCACGAAAATGAGAAGATTCTTGTATACGAGTACATGTCCAATGGATCTCTAGACGAACAACTACAAGATGGTAAACTATCATGGAAGAAGAGGCTAGAAATTTGCATAGGAGTAGCACGTATACTACACTACATTCACACCGGAGCTAAACGTACCATCTTTCACTGCATCCTAGGTCCTAATACCATCCTTTTGGATGACCACATGGAGCCAAAACTCTCTGGTTTTGGTGTTAGCCTGCAGGGATCACGTTTTATGTCAAAGCAGAAGCAAATGAATGTAGAGCATGTTATGGGTACTTGGGGCTTCATGGCTGCGCTGGTCACCGATGGTACCATCACAGCTAAATGGGATGTTTTCTCATTTGGTTTGGTTCTACTCGATGTTGTGTGCAGGAGAACCCTGACTGAAAAAAATTTTCCGGAGAACCACCCTGTTGAGGAGAAAATTGATCCGATTCTCAAAGGAAAGATTGCACCAGATTGTTGGCAAGTGTTTGTTGATGTCATGGTAAATTGCTTGAAGTATGAACCAGATGAGCGACCTACAATGGGTGAAGTAGAGGTGCAACTTGAGCACGCTCTATCGATGCAGGAACAAGCAGATATCACAAACTCCAACTGTGATTATACCATATTGTCCAAAACCATTATTCCACGTGGAGTGAAAGTGATGGGTGTATTGAGGAGAAGGTTTCCTGTGAGTTACACAGACACCAATAACACCTGA 1065 0.4207 MFLNCLGMCCSKPTTNTNSSRRQFPSLIEELCHQFSLIDIRKATDNFDTNRVVGRGLFSEVYKGCLQHNGASDYTVAIKRFNDQGWEAFNTEIELLCQLHHPRCVSLIGFCNHENEKILVYEYMSNGSLDEQLQDGKLSWKKRLEICIGVARILHYIHTGAKRTIFHCILGPNTILLDDHMEPKLSGFGVSLQGSRFMSKQKQMNVEHVMGTWGFMAALVTDGTITAKWDVFSFGLVLLDVVCRRTLTEKNFPENHPVEEKIDPILKGKIAPDCWQVFVDVMVNCLKYEPDERPTMGEVEVQLEHALSMQEQADITNSNCDYTILSKTIIPRGVKVMGVLRRRFPVSYTDTNNT 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00274 354 Gene3D Transferase(Phosphotransferase) domain 1 124 328 - -
Vian2g00274 354 PANTHER OS07G0166700 PROTEIN 31 310 IPR045272 GO:0004714|GO:0006468
Vian2g00274 354 FunFam Receptor-like protein kinase ANXUR2 11 123 - -
Vian2g00274 354 FunFam Receptor-like protein kinase ANXUR2 124 325 - -
Vian2g00274 354 Pfam Protein tyrosine and serine/threonine kinase 49 302 IPR001245 GO:0004672|GO:0006468
Vian2g00274 354 ProSiteProfiles Protein kinase domain profile. 47 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00274 354 SUPERFAMILY Protein kinase-like (PK-like) 21 303 IPR011009 -
Vian2g00274 354 Gene3D Phosphorylase Kinase; domain 1 8 123 - -
Vian2g00274 354 ProSitePatterns Protein kinases ATP-binding region signature. 53 79 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00274 Vian-Chr2 2893347 2894492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00274 3 314 Receptor kinase-like Gene Family AT3G51550 40.120 2.70e-64 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vian2g00274 PK_Tyr_Ser-Thr 1.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00274 - - pvu:PHAVU_008G028600g 534.643