Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian2g00273 | ATGCACCCAAAACTCACAGGTTTCTGCATTAGCGTAAAGGGGTCACGATTGATGTCAAAACCAAAGCCAATTAAAGTTGATGTTGTGGCTGGTACTCCTGGATACATGGCTAGAGAGCTTTTCACTGACGATGCCATCACAGATAAATCTGATGTTTATTCTTTTGGTATGGTTCTGCTAGAAGTTGTGTGTGGAAGGAAATACATAACAATGCCAGCTGAAAGAGAATTTCTGGAGAAGCCTGTTGAGGAAAAAGTTGATGCGAGCATCAAGGGAAAGATTGCACCAAAGTGTTGGGAAGTCTTCATAGATATCACCAAAAGATGCGTGATGTATGAACCGGATGAGCGACCAACAATGGGTGAAGTAGAGGTACAACTAGAGTATGCTTTGTCGTTGCAGGAACAGGCTGATACAAATACTAATGGTGATTATACCTTATTTTCCACCACAGTTATTCACCCAGGAGCGGAACTGATAGACAGCACAGAAGACAGTGATACTGAAGAAATGTAA | 516 | 0.4186 | MHPKLTGFCISVKGSRLMSKPKPIKVDVVAGTPGYMARELFTDDAITDKSDVYSFGMVLLEVVCGRKYITMPAEREFLEKPVEEKVDASIKGKIAPKCWEVFIDITKRCVMYEPDERPTMGEVEVQLEYALSLQEQADTNTNGDYTLFSTTVIHPGAELIDSTEDSDTEEM | 171 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian2g00273 | 171 | ProSiteProfiles | Protein kinase domain profile. | 1 | 130 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian2g00273 | 171 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 132 | IPR011009 | - | |
Vian2g00273 | 171 | PANTHER | OS07G0166700 PROTEIN | 2 | 134 | IPR045272 | GO:0004714|GO:0006468 | |
Vian2g00273 | 171 | Pfam | Protein tyrosine and serine/threonine kinase | 34 | 126 | IPR001245 | GO:0004672|GO:0006468 | |
Vian2g00273 | 171 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 153 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian2g00273 | Vian-Chr2 | 2845406 | 2846007 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian2g00273 | 28 | 143 | Receptor kinase-like Gene Family | AT3G51550 | 38.583 | 5.73e-23 | 92.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Vian2g00273 | PK_Tyr_Ser-Thr | 1.7e-12 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian2g00273 | - | - | gmx:100305395 | 228.409 |