Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00273 ATGCACCCAAAACTCACAGGTTTCTGCATTAGCGTAAAGGGGTCACGATTGATGTCAAAACCAAAGCCAATTAAAGTTGATGTTGTGGCTGGTACTCCTGGATACATGGCTAGAGAGCTTTTCACTGACGATGCCATCACAGATAAATCTGATGTTTATTCTTTTGGTATGGTTCTGCTAGAAGTTGTGTGTGGAAGGAAATACATAACAATGCCAGCTGAAAGAGAATTTCTGGAGAAGCCTGTTGAGGAAAAAGTTGATGCGAGCATCAAGGGAAAGATTGCACCAAAGTGTTGGGAAGTCTTCATAGATATCACCAAAAGATGCGTGATGTATGAACCGGATGAGCGACCAACAATGGGTGAAGTAGAGGTACAACTAGAGTATGCTTTGTCGTTGCAGGAACAGGCTGATACAAATACTAATGGTGATTATACCTTATTTTCCACCACAGTTATTCACCCAGGAGCGGAACTGATAGACAGCACAGAAGACAGTGATACTGAAGAAATGTAA 516 0.4186 MHPKLTGFCISVKGSRLMSKPKPIKVDVVAGTPGYMARELFTDDAITDKSDVYSFGMVLLEVVCGRKYITMPAEREFLEKPVEEKVDASIKGKIAPKCWEVFIDITKRCVMYEPDERPTMGEVEVQLEYALSLQEQADTNTNGDYTLFSTTVIHPGAELIDSTEDSDTEEM 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00273 171 ProSiteProfiles Protein kinase domain profile. 1 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00273 171 SUPERFAMILY Protein kinase-like (PK-like) 2 132 IPR011009 -
Vian2g00273 171 PANTHER OS07G0166700 PROTEIN 2 134 IPR045272 GO:0004714|GO:0006468
Vian2g00273 171 Pfam Protein tyrosine and serine/threonine kinase 34 126 IPR001245 GO:0004672|GO:0006468
Vian2g00273 171 Gene3D Transferase(Phosphotransferase) domain 1 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00273 Vian-Chr2 2845406 2846007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00273 28 143 Receptor kinase-like Gene Family AT3G51550 38.583 5.73e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vian2g00273 PK_Tyr_Ser-Thr 1.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00273 - - gmx:100305395 228.409