Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00265 ATGTTTCTGAAATGTTTTGGTGACTCAAGTTCATCTAGGAGACAATATCCAACCGTAATAGAAGAGTTGTGCCGTCATTTTTCTCTTGCTGATATTCGGAAATCAACCAACAATTTTGATCATAACAGAGAAATTGCAAAAGGAGGACTCGGTAAAGTATACAGAGGTTGTCTCCAACATAATGATGGTTCTTATTACGAAGTCGCAGTGAAGCGATTTCACGGGCAACGCTGTGAAATATTAAAAAGAGAAGTAGAGTTACCGTGTCAGCTTCGCCATCCTAATTGTGTGTCTATCGTAGGATTTTGCAACCACGAAACAGAGAGTATTATTGTGTATGAGAACATGTCCAATGGATCTCTGGATCGACACCTGGGAAGTGAGGTTAGGGAAGCACTGCCATGGAAAAAAAGGATACAGATTTGCATAGGAGCAGCTCGTGGACTACACTACCTTCATGCCGGACTCAAGCGCACCATCATTCACCATGACATCAACCCTAGAAAAATTCTTTTGGACGACAACATGCACCCAAAACTCTCAGGTTTCAGCTCTAGCTTAGTGGGAGCACATTTCAAGGAAAAACCAAAACCAATAAAAACGGATTTTTTAGGTACTTATGGTTACTTACCTGTTGAGTCATTTACGTCCAATAATGTCACAGATAAATGGGATGTTTACTCATTTGGTATGACTCTACTGGAAGTTGTGGGAGTAAGAAGAATTTTTGAACGGGTTTATTTTGAAATAGAAAAAGAATTACGGGAGAAGTGTATTGAGGAGAATATTGATCCGAAAATCAAAGGAGAGATTGCACCAGAATGTTGGCAAGTCTTTATAGACATCGCCTTAAGATGCATAAATAAGCAACCTGATGAACGACCAGCAATGGGTGAAGTGGAGGTGGAACTTGAGCTTGCTCTGTTGTTGCAGGAACAAGCAGATATCACAAATATCGCTAGTGATTATACCTTATTGTCCAAAACCGTTATTATCCCAAAATCAGAGGAGGGATTTGAGTTTGTCATTGGCCTGAAAGAACAGGAAACCGTATACAGTGACTCGGAAGACATGTTCCATAGGTAA 1086 0.4024 MFLKCFGDSSSSRRQYPTVIEELCRHFSLADIRKSTNNFDHNREIAKGGLGKVYRGCLQHNDGSYYEVAVKRFHGQRCEILKREVELPCQLRHPNCVSIVGFCNHETESIIVYENMSNGSLDRHLGSEVREALPWKKRIQICIGAARGLHYLHAGLKRTIIHHDINPRKILLDDNMHPKLSGFSSSLVGAHFKEKPKPIKTDFLGTYGYLPVESFTSNNVTDKWDVYSFGMTLLEVVGVRRIFERVYFEIEKELREKCIEENIDPKIKGEIAPECWQVFIDIALRCINKQPDERPAMGEVEVELELALLLQEQADITNIASDYTLLSKTVIIPKSEEGFEFVIGLKEQETVYSDSEDMFHR 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00265 361 Pfam Protein tyrosine and serine/threonine kinase 42 302 IPR001245 GO:0004672|GO:0006468
Vian2g00265 361 PANTHER OS07G0166700 PROTEIN 23 311 IPR045272 GO:0004714|GO:0006468
Vian2g00265 361 Gene3D Phosphorylase Kinase; domain 1 6 114 - -
Vian2g00265 361 FunFam Receptor-like protein kinase ANXUR2 116 326 - -
Vian2g00265 361 ProSiteProfiles Protein kinase domain profile. 39 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00265 361 SUPERFAMILY Protein kinase-like (PK-like) 12 304 IPR011009 -
Vian2g00265 361 Gene3D Transferase(Phosphotransferase) domain 1 116 324 - -
Vian2g00265 361 FunFam Receptor-like protein kinase ANXUR2 5 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00265 Vian-Chr2 2766091 2767325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00265 21 315 Receptor kinase-like Gene Family AT3G51550 40.850 9.85e-70 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vian2g00265 PK_Tyr_Ser-Thr 3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00265 - - var:108327132 473.396