Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00263 ATGTCCAATGGATCTCTAGATCGATACCTGGGAGATAAGGTTAGGGAAGCACTGCCATGGAAAAAAAGGATAGAGATTTGCATAGGAGCAGCGCGTGGAATACACTACCTTCATGCCGGACTCAAGCGCACCATCATTCACCGCAACATCAGTCCTCCCACCATTCTTTTGGATGAGAACATGCACCCAAAACTCTCAGGTTTCGGCCTTAGTTTAATGGGAGCACATTTCAAAGAACAGTCAAAACCAATACAATCGGAAATTATAGGTCGTCCTAGCCACTTACCTCTGGAGTACGTAAGGGACGGTACTGTCACACATAAATGTGATGTTTACGCATTTGGTGTTGTTCTGCTACAAGTTGTAAGGGGAACAAAAAATTTTCCAATGTCACAAGAACTTATGGGGAAGTCTATTATTGAGGAGAATATTGATCTGAAAATCAAAGGAAAGATTGCACCGGAGTGTTGGCAAGTGTTTATAGACATAGCCTTGAAATGCATAGAGGATGAACCTGACGAACGACCTGAAATGGGTGAAGTGGAGGTAGAACTTGAGCTTGCTCTGTTGTTGCAAGAACAAGCAGATGTCACAAACATCAATAGTTATTATACCTTATCGTCCAAAACCATTATTAACCCAAAATCTGAGTGGAGGTGGGGATTTGACGATGTGGCTACTAAGCTTTTGAAGTAG 696 0.4239 MSNGSLDRYLGDKVREALPWKKRIEICIGAARGIHYLHAGLKRTIIHRNISPPTILLDENMHPKLSGFGLSLMGAHFKEQSKPIQSEIIGRPSHLPLEYVRDGTVTHKCDVYAFGVVLLQVVRGTKNFPMSQELMGKSIIEENIDLKIKGKIAPECWQVFIDIALKCIEDEPDERPEMGEVEVELELALLLQEQADVTNINSYYTLSSKTIINPKSEWRWGFDDVATKLLK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00263 231 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00263 231 PANTHER OS07G0166700 PROTEIN 1 192 IPR045272 GO:0004714|GO:0006468
Vian2g00263 231 PIRSF ILK 1 199 - -
Vian2g00263 231 Pfam Protein tyrosine and serine/threonine kinase 1 183 IPR001245 GO:0004672|GO:0006468
Vian2g00263 231 Gene3D Transferase(Phosphotransferase) domain 1 1 209 - -
Vian2g00263 231 SUPERFAMILY Protein kinase-like (PK-like) 1 191 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00263 Vian-Chr2 2746252 2747072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00263 1 196 Receptor kinase-like Gene Family AT3G51550 41.346 5.40e-45 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vian2g00263 PK_Tyr_Ser-Thr 1.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00263 - - var:108327132 304.293