Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00212 ATGGCTTCAACCAACCCTTCTCCAAATGCTTCCCCTGTTGCAGTGCCTCCTGTTCTTGGTGGTATTTTATCACCACCACCTTCTTCATCTTCTCCAACCAATTCCTCCAACCCCCCATCATCTCTCAATTCTTCCCAGCCCAATCAAACACCCAATTCCCCTGCTCCTTCATCTCCCTCTGACCCTTCAGCTCCACCTCCTTCACCTCCTCAGGCAGTGCCTGTAACCCCTCCTCCTTCCATTTCACTCTCTCCTCCACCATCTTCTCCACCACCACCAACTCTGCCCCCTCCTTCACCACCAGATTCTCCACCGCCATTACCACCAGCATCTCCAACGCCACCAGTTGTAACATCTCCCCCCTCACCACCAGCCACCACCACTGCCCCTCCTCCAGCTGAGCTTCCACCTTCCCCTCCAGTTTTGTCTCCACCATCTTCACCAACTGTTTCCCCTCCTCCCCAATCTCCTCCCGCTACAATTCCCCCTCCTTCTCAACCAATTTCACCATCTCCTCCTCCTCCTGCCAATGTTCCAAGGCCACCATCCACTGGTACTCCTCCACAGAAAGAAAGTCCTCCCAAAACTACTCCTTCACATGCACCTCCTCCATCAGTTTCTCAATCTCCTCCTAAGCCTCCTTCTTCTGATGTTCCCCCTCCATCCACATTGCCATCAACTCCTTCAGTCCCTTCAGGATCTTCACCTCCAGCTTCTTTGCCTGACCCCCCAACCAATGAAACCGCCGTTGGGGGTCCACCGGTACCACTGCCGTCTCTTCCAACTGAGAAACCCACTGCTAGACCAACTAATGATGGTTCTAACGATATAGCTACAAACAACACGCCTTCACATTCAGGTGGGTTAAGTGCTGGAGGATCCGTCGCCATTGGAATTGTAGTTGGTTTTATTGTCCTCAGTTTTCTTGTTATGGCCGTGTGGTTTGTACAGAAGAAGAAGAAGAAGAGGGAAAAAGGATCAAGAGGTGGTTATGCTGCTCCTTCTCCATTTACCTCATCCCACAATTCAGGTACCTTATTCTTGAGGCCACAGTCTCCAGCCAACTTTGTAGCAGGTAGTGGATCTGGTAGTGATTTTGTGTATTCTCCATCAGAAGCAGGTGGAGTAAGTAGCTCGAGATCATGGTTCACGTATGAAGAACTTATCCAAGCTACAGATGGATTTTCGGCACAAAATTTGCTGGGAGAAGGTGGATTTGGTTGTGTCTATAAAGGTTTACTCGTAGATGGAAGAGAAGTAGCTGTGAAACAGCTCAAAATAGGTGGTGGGCAAGGGGAACGTGAATTCAGGGCAGAAGTTGAGATAATCAGCCGTGTGCATCATCGTCATCTGGTTTCCTTGGTTGGTTACTGTATATCTGAACATCAGAGATTGCTTGTATATGACTATGTTCCCAACAATACTCTTCATTACCATCTCCATGGCGAAAATAGACCAGTTCTGGATTGGCCTACCAGAATCAAGGTTGCTGCTGGTGCAGCTCGAGGAATAGCTTACCTGCATGAAGACTGTCATCCACGCATTATTCATCGAGATATTAAGTCATCAAACATCCTTCTTGATCTCAACTATGAAGCTCGAGTTTCGGACTTTGGGCTTGCAAAACTGGCATTAGATTCAAATACACATGTGACAACACGAGTAATGGGAACCTTTGGGTACATGGCACCAGAATATGCAACAAGTGGGAAACTAACGGAAAAGTCTGATGTATATTCCTACGGTGTTGTGCTTTTGGAGTTAATTACGGGTAGGAAGCCTGTAGATGCATCTCAACCAATCGGTGATGAGAGTCTGGTTGAATGGGCTCGGCCTTTGTTGAGTGAAGCACTTGAGAAGGAGGACTTTGAAATCTTGGTGGATCCAAGACTGGGAAAGAACTACGACAGAAATGAAATGTTCAGGATGATCGAGGCTGCTGCAGCCTGCGTACGCCACTCGTCGGTGAAGAGGCCACGGATGAGTCAGGTGGTGAGAGCTTTAGATTCCTTAGACGAGTTTACGGATCTGAATAATGGAATGAAACCGGGGCAGAGTTCGGTGTTTGATTCTGCACAGCAATCTGCACAGATCAGAATGTTTAGAAGGATGGCTTTTGGGAGCCAAGATAGTTCAAGTTTCTTCAATGAGTCTCAGAGTAGCTGGAGGAGTAGAGATCAGCACTCAGCAACCATGTTTTCCCAAAACAAAACTGGGTCTTGTAATGTTTGA 2232 0.4789 MASTNPSPNASPVAVPPVLGGILSPPPSSSSPTNSSNPPSSLNSSQPNQTPNSPAPSSPSDPSAPPPSPPQAVPVTPPPSISLSPPPSSPPPPTLPPPSPPDSPPPLPPASPTPPVVTSPPSPPATTTAPPPAELPPSPPVLSPPSSPTVSPPPQSPPATIPPPSQPISPSPPPPANVPRPPSTGTPPQKESPPKTTPSHAPPPSVSQSPPKPPSSDVPPPSTLPSTPSVPSGSSPPASLPDPPTNETAVGGPPVPLPSLPTEKPTARPTNDGSNDIATNNTPSHSGGLSAGGSVAIGIVVGFIVLSFLVMAVWFVQKKKKKREKGSRGGYAAPSPFTSSHNSGTLFLRPQSPANFVAGSGSGSDFVYSPSEAGGVSSSRSWFTYEELIQATDGFSAQNLLGEGGFGCVYKGLLVDGREVAVKQLKIGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLHYHLHGENRPVLDWPTRIKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDLNYEARVSDFGLAKLALDSNTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSYGVVLLELITGRKPVDASQPIGDESLVEWARPLLSEALEKEDFEILVDPRLGKNYDRNEMFRMIEAAAACVRHSSVKRPRMSQVVRALDSLDEFTDLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDSSSFFNESQSSWRSRDQHSATMFSQNKTGSCNV 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00212 743 Pfam Protein tyrosine and serine/threonine kinase 398 668 IPR001245 GO:0004672|GO:0006468
Vian2g00212 743 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 303 716 IPR047117 -
Vian2g00212 743 MobiDBLite consensus disorder prediction 264 288 - -
Vian2g00212 743 ProSiteProfiles Protein kinase domain profile. 395 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00212 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Vian2g00212 743 SUPERFAMILY Protein kinase-like (PK-like) 375 668 IPR011009 -
Vian2g00212 743 Gene3D Phosphorylase Kinase; domain 1 369 470 - -
Vian2g00212 743 MobiDBLite consensus disorder prediction 325 344 - -
Vian2g00212 743 MobiDBLite consensus disorder prediction 24 51 - -
Vian2g00212 743 PRINTS Proline rich extensin signature 44 56 - -
Vian2g00212 743 PRINTS Proline rich extensin signature 85 101 - -
Vian2g00212 743 PRINTS Proline rich extensin signature 24 40 - -
Vian2g00212 743 PRINTS Proline rich extensin signature 4 16 - -
Vian2g00212 743 PRINTS Proline rich extensin signature 58 79 - -
Vian2g00212 743 Gene3D Transferase(Phosphotransferase) domain 1 471 687 - -
Vian2g00212 743 MobiDBLite consensus disorder prediction 52 263 - -
Vian2g00212 743 ProSitePatterns Protein kinases ATP-binding region signature. 401 423 IPR017441 GO:0005524
Vian2g00212 743 FunFam Proline-rich receptor-like protein kinase PERK8 367 470 - -
Vian2g00212 743 SMART serkin_6 395 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian2g00212 743 MobiDBLite consensus disorder prediction 1 288 - -
Vian2g00212 743 FunFam proline-rich receptor-like protein kinase PERK8 471 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00212 Vian-Chr2 2171022 2176236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00212 210 727 Trihelix Transcription Factor Family AT5G38560 65.844 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Vian2g00212 PK_Tyr_Ser-Thr 5.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00212 - - gmx:100790988 933.71