Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00185 ATGTTTTTAGGTTTCTGTTGCATTCCTCGATTCGGTTATCGGTTTTCGCGAGTGATTTTCACGGAATCAAAGGAGAAAGCGAGAGAGCGCTGGATCGAGAGTCTCGATTCACTTTTTCTGATTTCACGGTTTCATTTTACTGTATTTGAATTACGCGCTTTCAGTTCTGATTCACGCGCTTTTCGACAAGGAAACTACTGCATAGGTGGATACGCTATTGACTTCGCTTTGATTCGAATCAAATCGGATTTCATTGCAATCATGACTCAGAACTTTTGCTCCAAGGAAGACACCATTTTTTGTGGTGTTTTTGATGGTCACGGACCTTACGGCCACAAAGTTGCGAAGAAAGTTAGGGATTCTTTTCCTTTAAAGCTTAATGCCCAATGGGATTTGCATCATAAGAATAGAGATGGAGTCAGTGATCATAGCAGTGCCAACGGAAGTTATAAATCTGAAGGGAATGGATTTAGACTGGTGGATGAGAAAACTTACCCCACTTATCATGAACTTGATGAAACAGATATTACTTTGACATTGAAAGAGTCTTATCTGAAAGCTTGTAAGCTCATGGACAAAGAACTGAAAATGCATCCTGATATTGACTGCTTTTGTAGTGGGACTACAGCAGTTACCTTGGTCAAACAAGGGCTGGACCTTGTTATTGGAAATATTGGGGACTCGAGAGCTATATTGGGTACCAGAGATCACGATGACTCTCTTATTGCTGTTCAGTTGACCGTTGACCTTAAGCCAAATCTTCCAAGGGAAGAAGAGAGAATTAGGCTTCGTAGAGGAAGGGTTTTTTCCCTTCACAATGAACCGGAGGTGGCTCGAGTTTGGTTGCCTAACTCTGATTTCCCTGGTCTTGCTATGGCTCGTGCATTTGGAGACTTTTGCCTGAAAGACTTTGGATTGATTTCTGTTCCAGATATCTCATATCACCACCTTACCGAGAAGGATGAGTTTGTTGTGCTAGCGACAGATGGGATTTGGGATGTTTTATCAAATGAAGAAGTCGTGGACATTGTAGCATCTGCTCCACGGTCTACTGCTGCTAGAGCACTGGTTGAGTCAGCTGTTCAGGCATGGAGGACAAAATATCCTTTTTGCAAGGTTGATGATTGTGCCGCGGTTTGCCTCTTCTTTGATCCAGATACAGATTTCAAGTCAAATGATACCAAAGGCAAGTTGGTATCCGAGGCATCTGTTGACCAATCTGAGGATTTATCTTGA 1236 0.4239 MFLGFCCIPRFGYRFSRVIFTESKEKARERWIESLDSLFLISRFHFTVFELRAFSSDSRAFRQGNYCIGGYAIDFALIRIKSDFIAIMTQNFCSKEDTIFCGVFDGHGPYGHKVAKKVRDSFPLKLNAQWDLHHKNRDGVSDHSSANGSYKSEGNGFRLVDEKTYPTYHELDETDITLTLKESYLKACKLMDKELKMHPDIDCFCSGTTAVTLVKQGLDLVIGNIGDSRAILGTRDHDDSLIAVQLTVDLKPNLPREEERIRLRRGRVFSLHNEPEVARVWLPNSDFPGLAMARAFGDFCLKDFGLISVPDISYHHLTEKDEFVVLATDGIWDVLSNEEVVDIVASAPRSTAARALVESAVQAWRTKYPFCKVDDCAAVCLFFDPDTDFKSNDTKGKLVSEASVDQSEDLS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00185 411 ProSiteProfiles PPM-type phosphatase domain profile. 62 383 IPR001932 -
Vian2g00185 411 Pfam Protein phosphatase 2C 177 361 IPR001932 -
Vian2g00185 411 SUPERFAMILY PP2C-like 82 384 IPR036457 -
Vian2g00185 411 CDD PP2Cc 96 383 IPR001932 -
Vian2g00185 411 MobiDBLite consensus disorder prediction 390 411 - -
Vian2g00185 411 Gene3D - 77 393 IPR036457 -
Vian2g00185 411 SMART PP2C_4 57 381 IPR001932 -
Vian2g00185 411 PANTHER PROTEIN PHOSPHATASE 87 381 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00185 Vian-Chr2 1793485 1798793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00185 87 384 PP2C-type Phosphatase Gene Family AT1G16220 61.842 5.90e-133 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00185 - - vum:124830906 657.136