Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00162 ATGGAGTCTAAAGAAGCAGCAAGTGTTATTTTAAATTTGATGGGTCTTGATAAAGTGCCTAACCAACATCCTGTCAGAGATAAACAGAAAGTGCTCTCTGAGAATTACCAGCAGAAAGTTGCTTCCATTGGTGTCAGAAGGAAGCGTTCATCTCATCAGCATCATTCCTTCGGAATGAATACTAGTGAAAAGGACAAATCTGAGGATGTTTTAGAAGTGTTCAAAGCACTCAGGAGAAGTAAGCATCATAACCCATCAAAAGGAAATGGGAAAGAGAATCCCGGTTCTAGCAAAAATTCTCAGTTGGCTGATGGGCTGCTCCAAGAGATAGGTTATCCTGAAAAGCAATATAGAAAGAAAAAATCTAGTCATATGAATTTTGGTAAGCCAAGTTCAAGATCTTTCAGTAAAATTTCAGAGGAGATTTCTATGCAATCCGGAAATGTTGCAAATGGAGCTTTACATAGTGCATCAACTTCTTTTTTCAGAGGGAATGAAGTTCTTTCCAATGATATGCTGAAGCCTGCTTTAAATATTTCAGTTAATGAGATCCAATTCAATTTCCCAATCTTCTGTTCAGATGGTTCATATATAGGCTCTCAAGCCAGGAGGAAAACTTTGGAACAGAGGGATGTGACTGAAAAGGTTCATGAACTTAGACCATTTGGTCGAGACTGTATACATAGCCAATTGCATATGATCTGGGAAAAAGGGAATGGAGCAAGAAATTTGACACATCAAAGGGGATATGGTAATGTTAGAATTAAGGCTGATGATAATTATAGCTTTGCTAGAAGAGTGCCAAGACCTCTTTGTTCAGCTTCAGCTCTTACTGATAATTGTGGAACTATGAATCAGGATATCTTGTTTCATAGATATTGGGGTTTGAGAAAAAATGCATCCTCAAATTGGTCATCATGGAACTCGAAGTATCAATATAATGGCCAGAAAGAATGTTTAGAAGACGTGAACCTCAGTTCTGGGGGTGAGAAATTCCCTTCCTTTTGCTCATATTTCAATAGTGATCATACTGAATTGCCAAGTTCTAGTTCTTCTCCCACCTTTATAGACGAACAGATGTTTCAAGAGAGAAACGTAATGAATGATGAAGTGAAGAACAGAAAGTATGATGACAGTAATATGTGGAAGCAAAATGTTGTGTCTCTTCACTCATCAGTTGAATTCTTGGTATCTGATGCAACAGCTGAGGTTGTTGACTGGACACATAGTCCAACCGAACATCAATCTAAATCAACAGCCTTCGTTTTGTCACAAGAAATTGATTGTTTGAATCATACTTCATATACCTCAAAGCAGCAGGATAGATCAGATTTTAATGAAGGTTCTGTTCATTTGCTTTGCCACGAGGTTCACCCAGATTCCCTTGGTAGCTCTGTGGAGTCATATGAACCAAGTCCAATCTCTGTTTTGGATCCCTTATTTGGAGAAGACATTCAATTCGGCTATAAAAGTGACGATCATATATATGATTCATCTGAGGTGGATGATGAAGAATGTGGTTTGAATGTTTCAAGTGATGAAGATTGTGAGAATGAATATGCACATAACTCTCAAGAAAAGAAAGAAATAGCAGGATTAGTTAGAGCTGAAGAAAGTAGGGATTTCTCATACGCTGTTGAGGTTTTAACAGAGGCAAGTATATTTAATAGGAACTTGTTTACAGACTTTTCTACATGGCACTCTTCACAATGTCCAATTAGTCCTTCCGTCTTTGAAAATCTGGAAAAGAAATTTGGCCAACAACAGTTTTGGAGCAGATCTGAAAGGAAACTGCTCTTTGATCGCATTAACATTGGGTTGATTCAGATTCTTGAGCCATGCTTATTTGTTCCAATGTGGGAAAAGTCAACATCAAGAAGATTGAATGTTGAACTAAACCAGAACATTATTGAAGATGAGATGTGGGGGTTGCTTGTTGTGCAAGAAAAGAAAGCAAGTAATGAGTATGCAGACCATACACTTGAAGGGAAGATTAGATGGACAGAACTAGTTGAAGATGTTGAGGATATTGTTACAGAGATAGTTAATTTGGTAACAGAGGAGCTTGCAAACGAGATAGTTCTCTCTGTAAATTTTTGA 2100 0.3767 MESKEAASVILNLMGLDKVPNQHPVRDKQKVLSENYQQKVASIGVRRKRSSHQHHSFGMNTSEKDKSEDVLEVFKALRRSKHHNPSKGNGKENPGSSKNSQLADGLLQEIGYPEKQYRKKKSSHMNFGKPSSRSFSKISEEISMQSGNVANGALHSASTSFFRGNEVLSNDMLKPALNISVNEIQFNFPIFCSDGSYIGSQARRKTLEQRDVTEKVHELRPFGRDCIHSQLHMIWEKGNGARNLTHQRGYGNVRIKADDNYSFARRVPRPLCSASALTDNCGTMNQDILFHRYWGLRKNASSNWSSWNSKYQYNGQKECLEDVNLSSGGEKFPSFCSYFNSDHTELPSSSSSPTFIDEQMFQERNVMNDEVKNRKYDDSNMWKQNVVSLHSSVEFLVSDATAEVVDWTHSPTEHQSKSTAFVLSQEIDCLNHTSYTSKQQDRSDFNEGSVHLLCHEVHPDSLGSSVESYEPSPISVLDPLFGEDIQFGYKSDDHIYDSSEVDDEECGLNVSSDEDCENEYAHNSQEKKEIAGLVRAEESRDFSYAVEVLTEASIFNRNLFTDFSTWHSSQCPISPSVFENLEKKFGQQQFWSRSERKLLFDRINIGLIQILEPCLFVPMWEKSTSRRLNVELNQNIIEDEMWGLLVVQEKKASNEYADHTLEGKIRWTELVEDVEDIVTEIVNLVTEELANEIVLSVNF 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00162 699 MobiDBLite consensus disorder prediction 43 101 - -
Vian2g00162 699 Pfam Domain of unknown function (DUF4378) 541 692 IPR025486 -
Vian2g00162 699 MobiDBLite consensus disorder prediction 58 79 - -
Vian2g00162 699 PANTHER AFADIN 5 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00162 Vian-Chr2 1560365 1563855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00162 430 694 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 32.056 3.71e-32 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00162 - - vun:114185209 1143.64