Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00158 ATGGAGATAAGCTACGCATCGCCAAGTTTCTACGACCTCCCCGCCGCCGCTGCCGTTGCTTCAACCATGCCGTCCTCCGCGACCGGCGCACGTCCTGTAAGGATCATTCCTCTTCAGCATCCGACCGCCACCTCGTCCTCGTCTCCGCCGGCGAACGTCGCCTTCGCGCGGTGGACCGCGAAGCTCAGGCAGATGACGTGGCTCGAGTGGCTTGAGTTCTTCCTCCCTTGCCTACGCTGGATTCGCATCTATAAATGGCGCGAGTATTTCCAGGTCGATCTCATGGCCGGAATCACCGTCGGTGTCATGCTCGTTCCTCAGTCGATGTCGTATGCAAAATTGGCTGGACTTGAACCGATATATGGACTCTACTCTGGTTTTGTGCCTATATTTGTGTATGCCATATTCGGGTCTTCTCGCCAGCTTGCAGTAGGCCCAGTGGCATTGGTTTCCCTCTTGGTATCTAACGTGCTAAGTGGCATAGCTGACTCGTCCAGTGAATTATACACAGAGCTTGCAATATTACTGTCCCTTATGGTGGGGATAATGGAGTGTATAATGGGACTATTGAGGCTTGGATGGCTTATTCGTTTCATTAGCCATTCAGTGATTTCTGGCTTTACAACTTCTTCAGCTATTGTCATTGGTTTATCTCAAGCTAAGTATTTCTTGGGGTATGATGTAGACAGAAGTAGCAAGATCATTCCAGTAGTTAAGAGTATAATAGATGGAGCAGATAAGTTTTCATGGCCACCTTTTGTGATGGGATCCATTATGCTTGCGATACTACTTGTCATGAAACACCTCGGAAAATCAAGGAAGTACTTGCGATTCTTGAGAGCTTCTGGTCCTCTTACAGCAGTAGTTCTGGGAACAATTTTTGCTAAAGTTTTTCATCCACCGTCAATTTCTTTGGTGGGAGATATACCTCAAGGCTTACCAAAATTTTCTGTTCCAAAAGCTTTTGAGTATGCACAGTCCTTAATTCCAACTGCTATTCTCATAACCGGTGTGGCTATACTGGAATCAGTGGGAATTGCCAAGGCATTAGCAGCGAAGAATGGGTATGAGTTGGATTCAAATCAAGAGTTGTTTGGTCTTGGTGTTTCCAATGTTCTTGGTTCATTCTTTTCAGCATACCCCACCACAGGATCCTTTTCAAGGTCAGCTGTAAATTATGAGAGTGGTGCAAAATCTGGGGTATCTGGGATTGTTTCAGGAATTATAATGATCTGTGCACTTATGTTTCTAACACCATTATTTGAGTACATACCTCAGTGTACCCTTGCTGCTATTGTGATCTCTGCTGTGATAGGTCTGGTAGATTACGAGGAGGCCATTTTTTTGTGGCGTGTTGATAAGAAAGATTTTATTCTTTGGACCATTACTAGCACTACAACATTGTTCCTTGGCATTGAGATCGGTGTCCTTGTTGGGGTTGGGTTTTCACTTGCTTTTGTCATTCATGAGTCAGCAAATCCACATATTGCTGTTTTGGGTCGTTTGCCTGGGACAACTGTTTATAGGAATGTTAAACAGTATCCTGAAGCATATAAATATAATGGAATTGTAATTGTTCGTGTTGATGCTCCAATTTATTTTGCAAACACGAGTTTCATAAAGGACAGGTTGCGTGAATATGAAGTTCATGTTGATAGTTCTAAAAGCCGTGGACCTGAGGTTGAAAGAATTTATTTTGTGATTCTTGAGATGGCACCTGTGACCTACATAGACTCTAGTGCTGTTCAAGCTTTGAAAGACCTATATCAGGAGTACAAATTACGGGACGTTCAGATTGCAATATCCAATCCAAACCCAGAAGTTCTGCTCACCCTGTCAAAATCCGGTCTGGTGGAGTTGATAGGTAAAGAATGGTACTTTGTGAGAGTACATGATGCTGTGCAAGTTTGCTTGCAACATGTTCAAAGCTTGAAAGCAGGATCTGACAGTTCACACACGCCACTTTCTTCATTAGAAGACAAACCAAGTTTGTTTGCTCGATTGTCGAAAGAGAGAGCGGAGAAGTTTCCAGTTACCGACTTAGAATCTGGTAATGGCAGGCCGCCACTCCCCAAGGACAGAGATTCCCAGTCGGAGCCATTGTTGTCCAAAGAACGTTGA 2121 0.4437 MEISYASPSFYDLPAAAAVASTMPSSATGARPVRIIPLQHPTATSSSSPPANVAFARWTAKLRQMTWLEWLEFFLPCLRWIRIYKWREYFQVDLMAGITVGVMLVPQSMSYAKLAGLEPIYGLYSGFVPIFVYAIFGSSRQLAVGPVALVSLLVSNVLSGIADSSSELYTELAILLSLMVGIMECIMGLLRLGWLIRFISHSVISGFTTSSAIVIGLSQAKYFLGYDVDRSSKIIPVVKSIIDGADKFSWPPFVMGSIMLAILLVMKHLGKSRKYLRFLRASGPLTAVVLGTIFAKVFHPPSISLVGDIPQGLPKFSVPKAFEYAQSLIPTAILITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVLGSFFSAYPTTGSFSRSAVNYESGAKSGVSGIVSGIIMICALMFLTPLFEYIPQCTLAAIVISAVIGLVDYEEAIFLWRVDKKDFILWTITSTTTLFLGIEIGVLVGVGFSLAFVIHESANPHIAVLGRLPGTTVYRNVKQYPEAYKYNGIVIVRVDAPIYFANTSFIKDRLREYEVHVDSSKSRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKLRDVQIAISNPNPEVLLTLSKSGLVELIGKEWYFVRVHDAVQVCLQHVQSLKAGSDSSHTPLSSLEDKPSLFARLSKERAEKFPVTDLESGNGRPPLPKDRDSQSEPLLSKER 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00158 706 MobiDBLite consensus disorder prediction 687 706 - -
Vian2g00158 706 Gene3D STAS domain 493 641 IPR036513 -
Vian2g00158 706 MobiDBLite consensus disorder prediction 675 706 - -
Vian2g00158 706 Pfam STAS domain 514 633 IPR002645 -
Vian2g00158 706 Pfam Sulfate permease family 90 463 IPR011547 GO:0016020
Vian2g00158 706 NCBIfam sulfate permease 76 633 IPR001902 GO:0016020|GO:0055085
Vian2g00158 706 PANTHER SULFATE TRANSPORTER 55 643 IPR001902 GO:0016020|GO:0055085
Vian2g00158 706 ProSitePatterns SLC26A transporters signature. 119 140 IPR018045 GO:0008271|GO:0008272
Vian2g00158 706 ProSiteProfiles STAS domain profile. 513 637 IPR002645 -
Vian2g00158 706 CDD STAS_SulP_like_sulfate_transporter 514 630 - -
Vian2g00158 706 FunFam Sulfate transporter 31 493 640 - -
Vian2g00158 706 SUPERFAMILY SpoIIaa-like 515 637 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00158 Vian-Chr2 1525312 1533172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00158 3 667 Inorganic Solute Cotransporters AT5G13550 72.107 0.0 980
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00158 K18059 - gmx:100794754 1219.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00158 2 1525312 1533172 Vian2g00158 2 1525312 1533172 ECH