Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00152 ATGGCTCTTCCAAGACCAAGCAGTGAAGAGAAAGCCCTTTCTCAGCTCAAAGAAGGAACAGCATCATCATCAGCAGCAGCACCACCTTCATCATCTTCTTCATGGAATAGGCTTCACACTTTCTCTCCTTTGAATCTACACAACAAGACTAGCAAAATTGAAGACAGTGATGAAGATATGTTCACAGTTCCAGATGTCGAGACCACACCCATTAATGTTCATTCTCATCCAAACAGTAACCTTAAACAATCTAACGTGACAGAACCTCAGTTTCAAACTGGTTTCCCTGGAAAGCGTCGCAGGGGAAGAAACCCTGCAGATAAGGAACATAGACGTCTCAAGAGGTTGTTGAGAAATAGAGTTTCTGCTCAACAAGCTCGAGAAAGAAAGAAGGTTTATGTGAATGATTTGGAAGCAAGAGCCAAAGAGTTGCAAGATAAAAATGCTATCTTAGAAGAACGTATCTCTACTTTGATAAATGAGAACACCATGCTTAGAAAGGTTCTTATGAATGCCAGGCCAAAAGTTGATGATAGTAATGAACAAAAGCAAGAGCACTTAAGTAAGAGCTAA 573 0.4049 MALPRPSSEEKALSQLKEGTASSSAAAPPSSSSSWNRLHTFSPLNLHNKTSKIEDSDEDMFTVPDVETTPINVHSHPNSNLKQSNVTEPQFQTGFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLEARAKELQDKNAILEERISTLINENTMLRKVLMNARPKVDDSNEQKQEHLSKS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00152 190 Pfam bZIP transcription factor 108 167 IPR004827 GO:0003700|GO:0006355
Vian2g00152 190 MobiDBLite consensus disorder prediction 13 39 - -
Vian2g00152 190 MobiDBLite consensus disorder prediction 73 92 - -
Vian2g00152 190 Coils Coil 127 161 - -
Vian2g00152 190 MobiDBLite consensus disorder prediction 1 39 - -
Vian2g00152 190 CDD bZIP_HY5-like 121 162 - -
Vian2g00152 190 MobiDBLite consensus disorder prediction 73 110 - -
Vian2g00152 190 Gene3D Single helix bin 130 171 - -
Vian2g00152 190 SUPERFAMILY Leucine zipper domain 111 170 IPR046347 GO:0003700|GO:0006355
Vian2g00152 190 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 114 129 IPR004827 GO:0003700|GO:0006355
Vian2g00152 190 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 19 187 IPR044280 GO:0000981|GO:0045944
Vian2g00152 190 FunFam Transcription factor HY5 130 171 - -
Vian2g00152 190 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 109 172 IPR004827 GO:0003700|GO:0006355
Vian2g00152 190 SMART brlzneu 107 171 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00152 Vian-Chr2 1463097 1466480 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00152 90 179 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 74.725 2.94e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian2g00152 bZIP_1 3.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00152 K16241 - gmx:778143 299.671