Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00145 ATGTCCTACCAGCATAAAAGTTTTTGGATGCCACGAGATGCTGGCTGCATGGCTGAAGAAAATGTGGGATATGAAAATTCTTCCAGAATTGAACCCAAACGTAGTCATCAGTGGTTTATGGATACAGGTGAACCTGAAATATTCAGCAACAAGAAACAGGCAGTTGAAGATGTAAGTGGTAGGCCAATTTCAGGAGTTTCACATGTGAATGTTTCCCAATGGGACACCAATTCAGGATTTCACTGTGTCACAGGTCAATTTTCTGACCGTCTTTTTGGATCTGATCTTGCTAGGACAGTGAATTTGGTTGATAAGAATGTGCCATCTATTGTTAGTGGAAATATAAACATGGGAAGGAAGGAATTTGAGCATCAATATGGTAATGATCCTTCAGTGGGATTGTCAATATCTCATTCCATTGCGGACCCTTCATCATGTCTCAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTTAGAGATTCTGACAATTGCATGCCTTCTGCATCCATGGGGCACTCCTATAGCAGGGAAGATGATAGTACAATTTCAGTAGGTGCTGGCTACAGTAAGAATGATGGCAGTATTTCGTTGGGTCCTACTTATAACAATAGAAGTGACAACACCATTGGTATGGGGACTAGAATAAATAGCAAGACTGATGACAATCTTCTTTCAGTGGCTCACAACTTCAATAAAGCGGATGGGGGTTTTATGCTGATGGGCCACAATTATGGAAAGGGAGATGATAGTATCTTATCAATGGGTCAGCCCTTTGACAAGGGAGATGGAAATTTCATATCAATGGGTCAATCATATGAGAAAGAAGATGGAAATCTAATATCTCTGAGCACCTCATATTCCAAGGGGCATGAGAGTTTTATATCAATTGGTCCAACCTATGGTAAATCAGGAGAGAATTTCATTACTGTTGCTCCTTATGACAAGGGTACCGATCATTTAATATCAATGGGCTCAACATATGGTAAGGTGGATTCAAATATTGCATCAACAGTTCCATCATATGACAGAGGAGATTCCAGTTCTTTACCTGTGGGTCAAAATCACCATAAGGGTCAGAGCAGTACCATATCTTTTGGAGGTTTTCATGATGATCCTGAAGCAAATCCCTCTGGTGGAATAATTAGTGGCTATGATCTGTTGATAGGAAACCAAAACTCAGCTCAAGGTTTGGATGGTCAGAATGATCTGACTGAAACAAACACTGAATCACTTGTAAATAGCATTCCAAAACTTAATACTAAAAATGATATTGTTGTTAAGAACAAAGAGCCTAAGACAACAACCAAGAAGGCTCCTACGAACAACTTCCCTTCAAATGTCAAAAGTTTGCTGTCAACCGGTATTTTTGATGGTGTCCAGGTGAAATATGTTTCATGGTCACGGGAGAAAAGTCTTAAAGGAATCATAAAAGGAACTGGGTATTTGTGTTCATGTGATGACTGCAAGCAGTCAAAGGCTCTTAATGCATATGAGTTTGAGCGTCATGCTGGTGCCAAGACAAAACACCCCAATAATCACATATACTTCGAGAATGGAAAAACCATCTATGCTGTTGTTCAAGAACTGAAAAATACTCCTCAGGAGATGCTTTTTGATGCAATTCAAAATGTGACTGGCTCTACCATCAACCAAAAGAACTTTCGAGGATGGAAAGCATCATACCAAGCTGCTACTCGGGAGCTTCAACGTATTTACGGAAAGGATGAAGTGATAATTCCATCTTGA 1752 0.3967 MSYQHKSFWMPRDAGCMAEENVGYENSSRIEPKRSHQWFMDTGEPEIFSNKKQAVEDVSGRPISGVSHVNVSQWDTNSGFHCVTGQFSDRLFGSDLARTVNLVDKNVPSIVSGNINMGRKEFEHQYGNDPSVGLSISHSIADPSSCLNFGGIRKVKVNQVRDSDNCMPSASMGHSYSREDDSTISVGAGYSKNDGSISLGPTYNNRSDNTIGMGTRINSKTDDNLLSVAHNFNKADGGFMLMGHNYGKGDDSILSMGQPFDKGDGNFISMGQSYEKEDGNLISLSTSYSKGHESFISIGPTYGKSGENFITVAPYDKGTDHLISMGSTYGKVDSNIASTVPSYDRGDSSSLPVGQNHHKGQSSTISFGGFHDDPEANPSGGIISGYDLLIGNQNSAQGLDGQNDLTETNTESLVNSIPKLNTKNDIVVKNKEPKTTTKKAPTNNFPSNVKSLLSTGIFDGVQVKYVSWSREKSLKGIIKGTGYLCSCDDCKQSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSTINQKNFRGWKASYQAATRELQRIYGKDEVIIPS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00145 583 MobiDBLite consensus disorder prediction 343 368 - -
Vian2g00145 583 MobiDBLite consensus disorder prediction 343 376 - -
Vian2g00145 583 Pfam Tify domain binding domain 476 531 IPR032308 -
Vian2g00145 583 PANTHER AUTOIMMUNE REGULATOR 8 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00145 Vian-Chr2 1385897 1391315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00145 438 564 PHD Transcription Factor Family AT3G53680 55.906 6.97e-41 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00145 - - gmx:100782217 1070.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00145 2 1385897 1391315 Vian2g00145 2 1385897 1391315 ECH