Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00132 ATGATCTTTAGAACACTTGTCCTAGTTCTGGCTTTTATGGTGGCAAATTCAACAGCTCTTGCGGATCAACAGACATATATAGTTCACATTGACAAGACTAAGATCAGAGCCTCAATTCATTCTCAAGACAGCTCAAAGCCATGGTTTGAATCCATTATTGATTCTATTTCTGAAGCTTCAATGCAAGAAGACGGAGAAGAAGATATTTTAGCCCCTCAACTCCTTTATGCCTATGAAACCAGCATGTTTGGTTTTGCTGCCCATCTTTCCAAGAAACACCTCAAATACTTGAACCAAGTTGAGGGTTTCCTCTCAGCTATACCTGATGAACTATCAACACTCCACACAACGTACAGCCCACAGTTTCTTGGCCTAAGGAGTGCAACCAAGGAAGCGCAGTATTGCACTGGAGGCTCCCTTGATCCAAAGCTTGTGCATGGGAAAATAGTTGCTTGTGAAAGAGGAATAAATGGTAGAACTGAGAAAGGAGAGGAAGTGAAAATGGCAGGTGGGTCTGGAATGATTCTTCTCAACAATGAATATCAAGGAGAAGAGCTTTTTGCTGACCCTCATATTCTGCCAGCCACATCCTTGGGGGCTTCTGCAAGCAAGATTGTCAGAAGCTATAGTGAATCTGTTAAAAAACCAACAGCTTCAATTTCCTTTATGGGGACGAAGTTCAGGGACCCTGCACCAGTGATGGCAGCATTTTCTTCAAGAGGACCAAGTTTAGTGGGATCAGATGTGATTAAGCCTGATGTGACTGCACCTGGTGTGAACATTTTGGCTGCTTGGCCACCCAAAATCAGCCCAAGCTTTCTCAAGAGTGACAAAAGAAAAGTATCATTCAACATACTTTCAGGTACTTCAATGTCTTGTCCTCATGTCAGTGGCATAGCAGCACTGCTCAAGTCTTTGCACAAAGATTGGTCCCCTGCAGCCATTAAATCTGCTCTCATGACTACTGCATACACATTGAACAACAAAGGAGCTCCAATTTCAGACATGGCTTATAATGACTCACCATTGGCTACTCCCTTTGTATTTGGTTCAGGCCATGTTAACCCTGTAAGTGCTTCTGATCCAGGGTTAGTGTATGATATCAGCACCAAAGACTACTTCAATTATCTTTGTAACATAAACTATACTTCTTCCCAGATTGCTTTATTATCAAGAAGTAACTTTGTATGTTCTAGAAAAGCATTTCTACAAGCTGGTGACTTGAACTACCCTTCATTTGCTGTTCTATTTGGCAGAAGTGCCTTTAATGCTAGTGTGACATACAGAAGGGTTGTCACAAATGTTGGAAAATCCCGAAGTTCTTATGCAGTTAAAGTGGAACAACCGAATGGAGTTTCAGTTAGTGTTGAACCAAGGAAATTGAAGTTTGAAAAACTGGGTCAGAAATTAAGCTATAATGTGACATTTTTGGCAACTGGAGGAGGTAAAGTTGGTGGTAGCTCATCATTTGGGTCACTGATTTGGGTATCTGACAGATATAAAGTTAGAAGTCCTATAGCAATAACCTGGCAATAG 1536 0.4141 MIFRTLVLVLAFMVANSTALADQQTYIVHIDKTKIRASIHSQDSSKPWFESIIDSISEASMQEDGEEDILAPQLLYAYETSMFGFAAHLSKKHLKYLNQVEGFLSAIPDELSTLHTTYSPQFLGLRSATKEAQYCTGGSLDPKLVHGKIVACERGINGRTEKGEEVKMAGGSGMILLNNEYQGEELFADPHILPATSLGASASKIVRSYSESVKKPTASISFMGTKFRDPAPVMAAFSSRGPSLVGSDVIKPDVTAPGVNILAAWPPKISPSFLKSDKRKVSFNILSGTSMSCPHVSGIAALLKSLHKDWSPAAIKSALMTTAYTLNNKGAPISDMAYNDSPLATPFVFGSGHVNPVSASDPGLVYDISTKDYFNYLCNINYTSSQIALLSRSNFVCSRKAFLQAGDLNYPSFAVLFGRSAFNASVTYRRVVTNVGKSRSSYAVKVEQPNGVSVSVEPRKLKFEKLGQKLSYNVTFLATGGGKVGGSSSFGSLIWVSDRYKVRSPIAITWQ 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00132 511 Pfam Fibronectin type-III domain 407 508 IPR041469 -
Vian2g00132 511 SUPERFAMILY Subtilisin-like 225 364 IPR036852 GO:0004252|GO:0006508
Vian2g00132 511 Gene3D Peptidase S8/S53 domain 228 373 IPR036852 GO:0004252|GO:0006508
Vian2g00132 511 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 125 IPR045051 -
Vian2g00132 511 CDD PA_subtilisin_like 115 220 - -
Vian2g00132 511 ProSitePatterns Serine proteases, subtilase family, serine active site. 288 298 IPR023828 -
Vian2g00132 511 Gene3D - 126 227 - -
Vian2g00132 511 Pfam PA domain 135 202 IPR003137 -
Vian2g00132 511 Pfam Peptidase inhibitor I9 25 112 IPR010259 -
Vian2g00132 511 ProSiteProfiles Serine proteases, subtilase domain profile. 1 360 - -
Vian2g00132 511 FunFam Subtilisin-like protease SBT1.5 377 511 - -
Vian2g00132 511 Gene3D - 377 510 - -
Vian2g00132 511 Pfam Subtilase family 214 329 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00132 Vian-Chr2 1285609 1287918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00132 126 511 Subtilisin-like Serine Gene Family AT1G01900 54.872 4.43e-134 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00132 - - gmx:100790006 681.019