Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian2g00074 | ATGGCTGAAGTTGAATACCATGCAAAATCCACTGCTAATACCCCACCCCTAAAGCTCTTCGGCATCAACATTAACAAGTCCCCAGAAGATCAAACCGATCACGAAGCAGGTTCCGATTCTGAGCCTTTCATTGCAAGAAAATACGAGTGTCAGTACTGTTTCAGAGAATTCGCAAACTCACAAGCACTTGGAGGGCACCAAAATGCGCACAAGAAAGAGAGACAGCTCTTGAAACGTGCTCAAATGCAGGCTGCTCGCGGCTTTGTGGCTTCACACGTTCACAACACCATCATATCAACCTTCTCACCACAATCTCAGCCACCTTTATCGTGGCTATGCACACCACATGCATGGTCAGGTGGTGGTGCGTATGACTCAGGAGTGGCTTTTGTGACTCCCGGAAGACGAGTCTATGCCACGGCCCGTGCCTCCATCACTGGTGGCCTTGGCCATCGCAATCCTCCGGCGGAGATCGGTGGCTTCAACGGCCACAGCTTCGACGGCAGAGGTAACGGTGGTGGTGGTTTGGATTTGCATCTTAGCCTATGA | 549 | 0.5118 | MAEVEYHAKSTANTPPLKLFGININKSPEDQTDHEAGSDSEPFIARKYECQYCFREFANSQALGGHQNAHKKERQLLKRAQMQAARGFVASHVHNTIISTFSPQSQPPLSWLCTPHAWSGGGAYDSGVAFVTPGRRVYATARASITGGLGHRNPPAEIGGFNGHSFDGRGNGGGGLDLHLSL | 182 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian2g00074 | 182 | Gene3D | Classic Zinc Finger | 31 | 98 | - | - | |
Vian2g00074 | 182 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 50 | 70 | IPR013087 | - | |
Vian2g00074 | 182 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 48 | 75 | IPR013087 | - | |
Vian2g00074 | 182 | SUPERFAMILY | beta-beta-alpha zinc fingers | 46 | 75 | IPR036236 | - | |
Vian2g00074 | 182 | PANTHER | ZINC FINGER PROTEIN 5 | 7 | 182 | IPR044299 | GO:0010090 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian2g00074 | Vian-Chr2 | 766662 | 767210 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian2g00074 | 14 | 182 | C2H2 Transcription Factor Family | AT1G67030 | 43.284 | 2.14e-28 | 103 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Vian2g00074 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian2g00074 | - | - | gmx:100527555 | 257.684 |