Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00071 ATGAATGATTCCACGGCGAAGAATTTGGCTATCACGGAGAGGAAGGTGCAGCAGAAGCCGGGTGGTTGTGTTGGCATTTTCTTTCAGCTCATTGATTGGAAGAGGAAGCTCTCCAAGAAGAAGCTCTTCTCCAAGAAGCTTCTTCCTCCAGCTCGTGCGAAAAAGTTCAAGGGGGATGAAAAGATGCCAAATTCCAAGATTCACTTGATTGCTAATGAGAACAGTGGAGGTTTCCCAAGTGCTAATAAAAAAGGTGGGAATCATGGCTTAGATGTAGAACAGAAGAGTGAAATGCGAGTTCCGAGTCTGGTAGCCAGGTTGATGGGTCTAGAATCTATTCCGACTGCTCAGCGAGACAAGTCCAAGAAAGCCTTGTGTGGTGATGGGAAGAATGAGTCTTTGGGTGGTGACCATGGCGAGTTGGATAGGCAAGGCATGGGTTTGGAAATGGGAGTTGTGAAGCATGATTCAAGACCTCAGAAGCTTCAGAAAACCGGGTCCTATGAGAGAAGGGCAGTGACTAGGTTTGGAGCTGAGGCTTTCCAAATTAAGAGTGTATTATCACGAGGAAGAAAATATCATCACCATCATCATCATCATCATCATCATCCAAAGCTTGCTTCTTCTTTGAAGAGTCCGAGAATTCCTTCCGGAAAGAGTGCTTCTCGAAGCTCTAGGTTAATAGGAGCAGCTACTAAAATTTTGGAACCTGGACTGCAAAGCAGAAGTAGGGCCAAAGGTTCTCTTACATATCCTGCTTCCATGTACCCTCCCAAGACTGGTATTGTGACCAATGATGTGCAAAATCAATCTTGTTATGAAGCTGGCTCATGCAAGCAATTGATGGAGCAGACCTCTTGCAAAAACTGTGGTAATCTGCTAGACGTAGTTGACTGCAAGCTTGAGGTTGGGGGACAGCCACTGGATCCTCCACCCGTTGTTTCTGATGTGATCACAGCTACCTCTATGGAATCATCAGAGAAGAAGGGAAAGTCATTAACTTCCCTTGGACATGACAGAGATGTAGTTCTTCTGAGAAGCCAGGAAAAGTTCATATCTCTTGATACTGAAGAGAAGGGGAAAAATAATGCACATAAGTCATGGAATGAGCCCACTGTTAGAAGAATGTCAATGCCCCATGATTGTCTACCTAAATGGAATTCATCTTGCCAACCATCAAGGACCCTGGAGGATGATGCATCTTCTTTTCGCTCAAAACACAAAATTCAAACACAAGAACAGATGTTAAGCAGTGAAAGATATTCATCTGGATCTACAATGAGCGATATGCAAGTAAAAGGGGTATCATCATCTACGAGTGCTATGAATGGTGCTAAGGACTTTGTTTCTATGAATAGAAGTCTTACTGGTCGAACAAGGACAAGATCACCTACCAAAGCTGACAGTTCTAGATTTGACCTAGAGAGAAAACCTTATAGTCGACAGCATAATTCTTTGTCTCACGTACGGACATTAGAGAGAAAAAGAAGGATCCCAAATGCCACTCAACTAGAAGGCACAGGTTCTGTTTATTCAGTTGGTCCAAAACAGAGAAATCTCCATTCTAATGGATTGGGTGGCAAAAGAAGGGACTCCAATGCTTCCTCCTTGAACAATTCCATTATAAGAAATAAGCAAGTTGCTCAAGGAGAAAGAATTATTAAGGTTAAGGACAACAAGATCAATGATGTAGTGTCATTTACATTTAATTCCCCCCTGAAGCAAAAGATAGGAGTAACTGTTGACAGGGAAGAGACAAGCACTGACAATGAGAGTATTAAAAGGCCTAAACCATTGAGAGTTGATGCTTTAGGTGTCTTTCTAGAACAAAAATTGAAGGAGTTAACCTCTCAAAGAGACGAAGAATTGGCTACAGGTGTTCCGCCTAAAAAATCAAGTGCCATGATTCTTCAAGAGCTGATATCTGCTTTAAGTTCAGAGCATTTGATCTGTCATGATGGTCATCCTGTGTTTAATGAAAATGTTGGTTTGCATTATGGGGAAAAACAAGAAAGGTTATTAGGAACCTCTTGCAATGGTAATCATCTCAGTCCCGGATCTGTTTTGGAAGCTTCTTTTTCTTCCAGTAGTCTGGATGAAAGCTCAGGGCATTGTTTTCACCCTGATTCCATGAATCACTCTTGTTATGGTCAACTAGAACATGAAGCTGAACTTTCAGATTCTGCAACATCCTTTACCAAAGGGAGGATAGGTGAGATACTGAGTGATCTTGTCAGCCAACTTCCCAGGGCATTGGAAAGTTTGCACACTTATGGGACAGAATTAACAATAAGCAAGCTTAACCATATGAAGGATATTCTCTTGCATACTGAGTTGGTGCTTGGAATTACAACTGATCGCAGACAGGATGAAGGGCCACAACTTATAATTCATCGGTTTCTCGTTGATGATCTTGAGAGCATGACGAGTGATACCATGTGGACAGATGTGAGTTGTGAGGATTCTAAACAGAGAAAGGAACTAAAGGGCTTTCTCCTTGACTGTGTTGTGGAATATCTAGAATCAAACTGCAGCCTTTATTTTAACTCTGGATTCAGGGCATGGACAAAGTTACCTTTATGCATGAGAGCTGAGATGTTGGCCAAAGAGGTGAAGAGGGAGATCAACAAATGGTTATCTATGGTTGGGATGGTACCTGATGAAATAATAGAATGGGAAATGAGCCACTCCTTGGGGAAATGGACTGACTTTGGTATTGAAGCATGTGAGGCTGGTGTTGATATAGATGGGGATATACTTCAAATTTTGGTCGATGAAGTTGTTGAAGACCTTGTAGGTTTCACTCATGGCTCCATCACCTTCTAA 2826 0.4214 MNDSTAKNLAITERKVQQKPGGCVGIFFQLIDWKRKLSKKKLFSKKLLPPARAKKFKGDEKMPNSKIHLIANENSGGFPSANKKGGNHGLDVEQKSEMRVPSLVARLMGLESIPTAQRDKSKKALCGDGKNESLGGDHGELDRQGMGLEMGVVKHDSRPQKLQKTGSYERRAVTRFGAEAFQIKSVLSRGRKYHHHHHHHHHHPKLASSLKSPRIPSGKSASRSSRLIGAATKILEPGLQSRSRAKGSLTYPASMYPPKTGIVTNDVQNQSCYEAGSCKQLMEQTSCKNCGNLLDVVDCKLEVGGQPLDPPPVVSDVITATSMESSEKKGKSLTSLGHDRDVVLLRSQEKFISLDTEEKGKNNAHKSWNEPTVRRMSMPHDCLPKWNSSCQPSRTLEDDASSFRSKHKIQTQEQMLSSERYSSGSTMSDMQVKGVSSSTSAMNGAKDFVSMNRSLTGRTRTRSPTKADSSRFDLERKPYSRQHNSLSHVRTLERKRRIPNATQLEGTGSVYSVGPKQRNLHSNGLGGKRRDSNASSLNNSIIRNKQVAQGERIIKVKDNKINDVVSFTFNSPLKQKIGVTVDREETSTDNESIKRPKPLRVDALGVFLEQKLKELTSQRDEELATGVPPKKSSAMILQELISALSSEHLICHDGHPVFNENVGLHYGEKQERLLGTSCNGNHLSPGSVLEASFSSSSLDESSGHCFHPDSMNHSCYGQLEHEAELSDSATSFTKGRIGEILSDLVSQLPRALESLHTYGTELTISKLNHMKDILLHTELVLGITTDRRQDEGPQLIIHRFLVDDLESMTSDTMWTDVSCEDSKQRKELKGFLLDCVVEYLESNCSLYFNSGFRAWTKLPLCMRAEMLAKEVKREINKWLSMVGMVPDEIIEWEMSHSLGKWTDFGIEACEAGVDIDGDILQILVDEVVEDLVGFTHGSITF 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00071 941 MobiDBLite consensus disorder prediction 119 142 - -
Vian2g00071 941 Pfam Domain of unknown function (DUF4378) 768 926 IPR025486 -
Vian2g00071 941 Pfam DUF761-associated sequence motif 93 119 IPR032795 -
Vian2g00071 941 MobiDBLite consensus disorder prediction 189 225 - -
Vian2g00071 941 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 8 930 - -
Vian2g00071 941 MobiDBLite consensus disorder prediction 502 519 - -
Vian2g00071 941 MobiDBLite consensus disorder prediction 189 208 - -
Vian2g00071 941 MobiDBLite consensus disorder prediction 407 463 - -
Vian2g00071 941 MobiDBLite consensus disorder prediction 464 500 - -
Vian2g00071 941 MobiDBLite consensus disorder prediction 393 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00071 Vian-Chr2 748882 752982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00071 1 931 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 31.818 7.09e-84 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00071 - - gmx:100813026 1486.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00071 2 748882 752982 Vian2g00071 2 748882 752982 ECH