Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00048 ATGGCTACCATTTCACTCAGGCATAACCCTCAAGTGAACAACACCAACCAGCAACGTGAAATCATCACCGAAGAGATCCAAGGACTCATTAGAGTCCACAGAGATGGACGTGTAGAGAGACCACCGATTGTGCCTACTGTCTCCTGCACAGTATCATCATCATCATCGTCTTCAAGTGCCAAAGATGTTACCATCAACAAAGAGACCAACTTATGGGCACGTGTTTACGTGCCTTCAATGAGTTATCACACAAAGGCTCTTCCTTTGATTGTGTACTTCCACGGTGGTGGATTCTGTGTTGGTTCCGCTGCTTGGAGCTGTTACCACGAGTTCTTGACCAACCTTGCTTCCAAAGCAAACTGTGTCATTCTCTCTGTGGATTATCACTTAGCCCCAGAGAATCGTCTTCCCGTGGCATACGATGACGGTTTCAACGCTCTCGCGTGGGTCAAAAGAGAAGCACAGAACATCTCTAGTGCGCAAAAGTGGTGGCTGACTCACTGCGACATGTCTTCCGTTTTCCTCGCCGGTGATAGTGCAGGCGCCAACATAGCTTATAATGTGGCCACCCGCATGGGATCATCATCATCATCAAACACGACAACACCATTATCCCTCAAGGGTGTCATACTGATCCAACCTTTCTTCGGAGGAGAAGAAAGAACTAGCTCTGAGAAGCATTTCCTTCAGCCACCCAATTCGGCGCTCACTTTATCCGTTTCCGACACTTACTGGCGCTTGGCGCTTCCTCTTGGAGCCACCCGTGACCACCCATATTGCAACCCTCTTGCACATGGCACGGTCAAGTTGAGAGATTTGAGGGTTTCTTCCATTATGGTGTGCGTTTCAGAAATGGATATACTGAAAGATAGGAACTTGGAGTTCTCAAAAGCTTTGGCTAAAGCAGGAAAAAGGGTTGAAACAGTTCTTTTCAAAGGCGTAGGCCATGCCTTCCAAGTGCTGCATAATTACCAGCTTTCACATTCCCGAACCCAAGAAATGATAACCCATATCAGAAACTTCGTTAACCAGTAA 1035 0.4725 MATISLRHNPQVNNTNQQREIITEEIQGLIRVHRDGRVERPPIVPTVSCTVSSSSSSSSAKDVTINKETNLWARVYVPSMSYHTKALPLIVYFHGGGFCVGSAAWSCYHEFLTNLASKANCVILSVDYHLAPENRLPVAYDDGFNALAWVKREAQNISSAQKWWLTHCDMSSVFLAGDSAGANIAYNVATRMGSSSSSNTTTPLSLKGVILIQPFFGGEERTSSEKHFLQPPNSALTLSVSDTYWRLALPLGATRDHPYCNPLAHGTVKLRDLRVSSIMVCVSEMDILKDRNLEFSKALAKAGKRVETVLFKGVGHAFQVLHNYQLSHSRTQEMITHIRNFVNQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00048 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 173 185 IPR033140 -
Vian2g00048 344 Gene3D alpha/beta hydrolase 28 344 IPR029058 -
Vian2g00048 344 PANTHER ARYLACETAMIDE DEACETYLASE 25 323 - -
Vian2g00048 344 SUPERFAMILY alpha/beta-Hydrolases 60 333 IPR029058 -
Vian2g00048 344 Pfam alpha/beta hydrolase fold 90 319 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00048 Vian-Chr2 472032 473066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00048 1 343 Carbohydrate Esterase AT5G16080 52.841 2.49e-125 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00048 - - gmx:100819429 556.984