Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00014 ATGAGTGATGTGGAAGGGATGGTGAAAAAGAAGGTGGGAAAAGGGCTCATCACCAAAACGTTGGAGCGATGCAAGTGGATAGGACGAGGCAAAAGCAGCATGATGATGATGAGGAGCAGATCCTGGCCCAGCCGCAAGGGAGCAAAGAAGAGCGGCAGCAGCAACAGCAACAGCAACAGCAGTTGTGTGGCACCCGAAGGTTGTTTCTCCGTCTACGTTGGACCACAAATGCAGAGGTTCGTTATCAAGACCGAGTACGCTAATCACCCTTTGTTCAAGATTCTTCTGGAAGAAGCAGAATCGGAGTATGGGTACAGCAGCCAAGGTCCTTTGGCTCTTCCCTGCCAGGTTGATATCTTTTACAAGGTGTTGATGGAAATGGAGTATTCTCGTGAAGAACAAGAGGAGCAACAGAGACTAACTCGTAAAGCTTCTGCTGGCTGTGTCTGTCTTAACCGCTCTCCCTCCGCTTATCGCCTTCTTCGTTCTTCCTCCGTCAAGCCATAA 507 0.497 MSDVEGMVKKKVGKGLITKTLERCKWIGRGKSSMMMMRSRSWPSRKGAKKSGSSNSNSNSSCVAPEGCFSVYVGPQMQRFVIKTEYANHPLFKILLEEAESEYGYSSQGPLALPCQVDIFYKVLMEMEYSREEQEEQQRLTRKASAGCVCLNRSPSAYRLLRSSSVKP 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00014 168 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 51 124 IPR003676 GO:0009733
Vian2g00014 168 MobiDBLite consensus disorder prediction 46 62 - -
Vian2g00014 168 Pfam Auxin responsive protein 38 124 IPR003676 GO:0009733
Vian2g00014 168 MobiDBLite consensus disorder prediction 35 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00014 Vian-Chr2 134915 135421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g00014 55 124 Calmodulin-binding Proteins AT3G43120 42.857 3.24e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g00014 K14488 - gmx:100777217 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00014 2 134915 135421 Vian2g00014 2 134915 135421 ECH