Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04248 ATGAGGTGGTGCAGAGAGGTGTTCTCTGTGCGTGGGTCTGGGTCGGGTGCTCATGCCATTGCGCTGTCACTCGCACCTATAGTTACTGCTTCCTTTTGCAGCAAAAGTCTTGTGTTGCCATTCCAAAATTTTCCTTTCGAATTCAAACTCACTGACTCATCTTCTCTTGCTCTCACCCATCGTAAGCAGCTCTTACCCGCTGCACTGTCACTAACACAGCCCTCTACTGCAAGGGAGGACGATTTTGATTTTGTGGTCGTCAATTTCTACCATTTTGTGTTCATCCAAGACCCACAAGCCGAAGTCTCCAAACACCGTTCTTTCTTGGAATTGCAGGACCTCGACATCAATGGAAGAGTCTATGTGAATGAACAAGGGATTAATGCCCAGTATAGTGGACCATCAAAAGATGCTCTGGCGTATGTCAACTGGTTAAGACAGGATAACAGGTTTTCTGACATATTGGTTCAGATATCTCCATCAGAAAATGGACATACCTTTCCAGCATTGAAGTTGCGTTATAAGCCTTCATTGGTACAGTTTGAAGGTGGTATGTCACATCTTCCGTTGCTTGATCCTTCGATGCGTGCAATAGCTTTATCACCAGCAGAATGGAAAGAAAGATTGGAAGCAGTCAATAAAACTGATCTTAGAGCAAAAGATTATCATGACAGAGATTTCATTCTATTGGATGTCAGAAATGGATTTCATGAGAAAAGTGAAACTGAAGGCCATGGTTATGAGTGGGATATTGGACATTTTCGTGGGACTCAACGACCTAGTGTGGACTGCTTTAGGAACACTTCTTTTGGTCTTTCTCAGGAAGAGGTTGGGTCATTATCTGATGTCTCAGTGCCTAATATCACTGCTTCAGATCCTTTATCAAACGTGGATAAAGAAAAGGCAAACATATTGATGTATTGCACTGGAGGGATTCGATGTGATGTATATTCTACAATACTAAGGAGGCAGGGGTTTCAGAATCTATATACCCTGAAGGGAGGTGTTTCTCACTATTTAAAGAACGAAGGGGCTGCTGAATGGGTGGGAAATTTATTTGTATTTGACTCCCGTTTGTCTCTCCCTCCTTCTGTCTACTATACTGGGGCCACAGCCGAAGCAGAATTAACTCCAGTTTCTGGAGATGATAAGTTTGCAAAATGCCATGTATGTAATTTGGAAGTGAGTGAATTGAGACATAGGAACTGCGCAAATCTTGATTGTAATTTGCTTTTTCTATGCTGCACAAAATGTGTAAAGGATCTAAGAGGTTGTTGTTGTTTGACGTGCACTACTGCTCATCGGCTTAGACCTGTTTTAAATGGAATGCAGAGATACAAAAAATGGCACAACTATCGGGATATGGATTTGCCAGAGCAATGA 1383 0.423 MRWCREVFSVRGSGSGAHAIALSLAPIVTASFCSKSLVLPFQNFPFEFKLTDSSSLALTHRKQLLPAALSLTQPSTAREDDFDFVVVNFYHFVFIQDPQAEVSKHRSFLELQDLDINGRVYVNEQGINAQYSGPSKDALAYVNWLRQDNRFSDILVQISPSENGHTFPALKLRYKPSLVQFEGGMSHLPLLDPSMRAIALSPAEWKERLEAVNKTDLRAKDYHDRDFILLDVRNGFHEKSETEGHGYEWDIGHFRGTQRPSVDCFRNTSFGLSQEEVGSLSDVSVPNITASDPLSNVDKEKANILMYCTGGIRCDVYSTILRRQGFQNLYTLKGGVSHYLKNEGAAEWVGNLFVFDSRLSLPPSVYYTGATAEAELTPVSGDDKFAKCHVCNLEVSELRHRNCANLDCNLLFLCCTKCVKDLRGCCCLTCTTAHRLRPVLNGMQRYKKWHNYRDMDLPEQ 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04248 460 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 199 342 IPR036873 -
Vian1g04248 460 SMART rhod_4 201 345 IPR001763 -
Vian1g04248 460 Pfam Rhodanase C-terminal 350 431 IPR022111 -
Vian1g04248 460 Pfam UPF0176 acylphosphatase like domain 85 176 IPR040503 -
Vian1g04248 460 ProSiteProfiles Rhodanese domain profile. 223 348 IPR001763 -
Vian1g04248 460 Gene3D - 192 372 IPR036873 -
Vian1g04248 460 Gene3D - 73 179 - -
Vian1g04248 460 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 77 445 IPR020936 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04248 83 454 Sulfurtransferasese or Rhodanese AT1G17850 63.351 2.95e-174 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04248 - - gmx:100814358 738.028