Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04244 ATGGGAGTGGAGGCGGTGGCTCTCAGTCTGCAGGGGAACACGATGCTTCCGATTCCCAGGAGAAGCGAAAGCGCTATCATCGCCCAGCACGAGAGAGCTGACAACTGTACTCTTCGGGCTGACAATGACAAGATACGCTGCGAGAACATAGCTATCAGAGAGGCTTTGAAAAATGTTATCTGCCCCTCTTGTGGTGGCCCTCCCCTCAATGATGATTCCTATTTTGACGACCAAAAGTTGCGATTAGAGAATGCTCACCTCAAAGAAGAGCTTGATAGAGTATCCAGCATTGCTGCCAAGTACATTGGAAGACCAATTTCCCAGCTCCCTCCTGTTCAGCCTATTCATTTATCGTCTCTCGACTTGTCGATGTCGTGTTTTGGAAACCAAGCGATGGTTGATCATGTTCTTGCACCTTCTCCTTCCCTTAATCTCGATCTTCTCTCTGCGGGGACTTCCTCTTCTGTGCCAAATTTTCCTTATCAGCCTCCTTACCTTTCGGACATGGACAAGTCCCTCATGTCCGAGATTGCTTCCAATGCCATGGAAGAATTACTTCGGCTGGTGCAGACAAATGAACCCTTGTGGCTCAAGTCCAACGTCGATGGGAGAGATGTCCTTAATTCTGATTCCTACGATAGAATTTTCCCCAAGCCCAATAGTCGCCCCAAGACTCCTAATCTTCGCCTTGAGGCATCACGAGATTCTGCAGTCGTATTAATGAATAGTTTGGCTTTGGTTGACATGTTTATGGACCCAAACAAGTGGATGGAACTTTTTCCCACTATTGTCTCAGTTGCAACGACTATTCAAGTCATATCTTCTGGGATGATGGGTGGTTCTTTGCAATTGATGTATGCGGAGTTGCAAGTGCTTTCTCCCCTTGTTTCTTCTCGGGAGTTCTACTTCCTTCGCTATTGCCAGCAAATTGAGAAAGGTACATGGGCAGTGGTGGACGTTTCTTACGATTTTCCTCAAGACAGCCATTTTGGTCCGCACTTTAGGTCTCGTCGTCGTCCTTCTGGTTGCTTGATCCAAGACATGCCGGACGGGCATTCCAAGATTACTTGGGTTGAACATGTAGAGATCGAAGACAAAACTCTGCCTCATCGGCTTTACAGAAATCTTATTTATAGTGGGATGGCATTTGGCGCTGAAAGATGGCTTGCAACTCTCCAGAGAATGTGTGAAAGACTTACATATCTGATGATTACATCCGATTCAACCGTGGATAATCCTGGAGGAGTAATTTCATCCGCCGAGGGCAAGAGGAGCATGATGAAACTAGCTCAAAGGATGGTCACGAATTTTTGTGGCAGCATTGGCACTGCAAGTGGCCGGCGATGGACCACAATCTCCGGGTTGAATGAAATATTAATCAGAGTCACAGTCCACAAAAGCTCAAATCCTGGACAACCTAATGGTGTGGTGCTAAGTGCAGCCACTACCATTTGGCTCCCCACCCCTCCACACACTGTCTTCAATTTCTTCAAGGATGAAACAAAAAGACCTCAGTGGGATGTTCTTTCCAACGGTAATGCAGTGCAAGAGGTTGCCCAGATAACCAATGGTCAAAATGCTGGTAACAGCATATCAGTTCTTCGATTCAAACGCAAACAGGAACAAGGCAAGGTCTGGGGGTTCGCTAGTCACAGTTGCATTTCAGATTCTAGTGAGCTCCTCGCCATCTGCCAAGTTGAATATGGAAGTGACAACTGTTTGTAA 1725 0.4672 MGVEAVALSLQGNTMLPIPRRSESAIIAQHERADNCTLRADNDKIRCENIAIREALKNVICPSCGGPPLNDDSYFDDQKLRLENAHLKEELDRVSSIAAKYIGRPISQLPPVQPIHLSSLDLSMSCFGNQAMVDHVLAPSPSLNLDLLSAGTSSSVPNFPYQPPYLSDMDKSLMSEIASNAMEELLRLVQTNEPLWLKSNVDGRDVLNSDSYDRIFPKPNSRPKTPNLRLEASRDSAVVLMNSLALVDMFMDPNKWMELFPTIVSVATTIQVISSGMMGGSLQLMYAELQVLSPLVSSREFYFLRYCQQIEKGTWAVVDVSYDFPQDSHFGPHFRSRRRPSGCLIQDMPDGHSKITWVEHVEIEDKTLPHRLYRNLIYSGMAFGAERWLATLQRMCERLTYLMITSDSTVDNPGGVISSAEGKRSMMKLAQRMVTNFCGSIGTASGRRWTTISGLNEILIRVTVHKSSNPGQPNGVVLSAATTIWLPTPPHTVFNFFKDETKRPQWDVLSNGNAVQEVAQITNGQNAGNSISVLRFKRKQEQGKVWGFASHSCISDSSELLAICQVEYGSDNCL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04244 574 Gene3D - 174 398 IPR023393 -
Vian1g04244 574 SMART START_1 176 398 IPR002913 GO:0008289
Vian1g04244 574 SUPERFAMILY Bet v1-like 168 399 - -
Vian1g04244 574 FunFam Homeobox-leucine zipper protein GLABRA 2 176 397 - -
Vian1g04244 574 Pfam START domain 177 398 IPR002913 GO:0008289
Vian1g04244 574 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 26 566 IPR042160 -
Vian1g04244 574 CDD START_ArGLABRA2_like 171 397 - -
Vian1g04244 574 ProSiteProfiles START domain profile. 167 401 IPR002913 GO:0008289
Vian1g04244 574 SUPERFAMILY Bet v1-like 421 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04244 Vian-Chr1 65299751 65302691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04244 20 535 Homeobox Transcription Factor Family AT1G73360 59.656 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04244 K09338 - gmx:100796042 897.886