Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04243 ATGGCCAAGAGATCAGATTTTGCACAGAAGCTGCTTGATGACCTCCGCCTCAGGAAACAACGAATGGCTTCGTCTCAAACTTCACACCAATCCCACCATTTTCCCATAGATGCATATGCTTACACAAAACAAGCATATAGAGGATCCAGAAATACAAAAGCTAACGAAATTGTGACTTCCAGAACTGGGGTGACGCTGAATAGCTCAAGTAGAAGCCACAGATCAGTAAACAATGGGCAAGTTTCAAACCAGATGGTCCCGTATGGGAAAGGTCAGAGCTCAAGGCTAACTGGTGACATGTCCCTTGCCCTGGCTTTTGCCTTAGAGAATGGAGGGAAACTAAAAAGAAGTGATTCAATTATGGGTTTCCTTCACCAAATTAACAGAGGAACATTGGAATTCAGCGTGCCAGAAAGACAAGTAGCTTCAACTAGCAACTATCCTATCCAAATAAACGAGATATCCAAAGGTGCACACAAACTAAACCAGATTTTGAGAGCCTGCACCAATGGCCTTAACATGGACACATATTCAATACAATTTGCAAAGGAACTACTGCAAGGAGCTATTGATTTGGAAGAGTCCCTCAGGATGCTAGTAGACCTGCAAAATAATTCACAGTTTATGATTACCTCGCAGAAGAAAAATCGAATCACACTATTAGAGGAGGATAATGATGACAACGATGACACGGGGATGGAAATGCAACTGACAAGATCAACTTTCTCTTTTGACAAACATACTACTCAGAACACCCAACAAATTGGAAAGGCTACTTTCATGCAGAGACCAATTAGTCTTACAAGCTCTAAGGAAGACAGCAACTCAAATAATGAGAACAAAACTGTGACGAGACAAGTTTCTCAGAAGCGATCAACTAAAACTAGCTCTATCTCTACCTCTGGCATTAAGAATGTCAATGCTAATTCAGAAGGGAAAAATCAGACGGCCTCCAACCCAGAGAAGGGCAGGATTCCAAATGTAATAGCCAAACTAATGGGGCTGGACATCCTTCCTGACAGAGGGGAAATGGATTCAAAACACGTGATGCTACAGAAAAGGGAAGGAATATCACCCAAGCATACTGCAAAAGGAAGAACTAAGAAGACTGAACTGCAGCGCAAAGAAACAGATAATTTGGTGCCTATAAAAGAGCAAAAGGATATAGAAGCTTTCAAAACTCCTGCAACTAAGGGTGAAGAGATGATGTCGGGGGCAAATACAAATTTTCTTGTAGAAAAAACCAGCTCTGGGTTGTCTCTTCAGAATGGAAAACCACTGTTGAGAGACCAGGATGGAATAAAAACACTGAAAGAATTTGACAAGCAGACTAAAAGTTCAGCTGAAAAGAATCTTACTAGAGATGGTCAAAATTATGTTCAGGGGATAATAAAAAAAAAGGATCATCCAAATAACAATAACAGGGAACATAAAGGCACTATAAGGGGCAGAACCGACTATCCAGTTCTTAACAATATGCTATCCCAGCTGGAACAAGTGAAAGAAAGATCAGAAGTTAAGCCCTCGATTCAGCCAGAAAAGGTCGTCAATGCAAACAATGTTCAGCCTGAAAAAAGGCACACAAACAAGAACATCACGAACAATGAAAAGAAGTCTCGGAACAATAATGGAATTCAAAAGACACACGTAGTCTCCAAAAATGGGCTTCATGAAGAAAAGCATCGCAGAGAACAACTCCAGGTTAAGGAAGAACAAATGCTGATGATGAGACCACAAGGAGGGAGTGAAATCAGCTCAAAAAACTCACCAAAATCCCCTCCTTCTCAGAAGAAGCAGCTATCCATGAACCAGGGGTTCAAGAAAAACTCCGGAGAAAAAAATGTAGCTGCTATGAAATCGGAAGGCCTTTTAACAAATCATTATAATCTAGTCAGAGATGAAGCATCCAATTATACAAATGAGAAAGTAAAAGAAATTGTCCATAGGAAGTCAGGCCAAATTTCCTCTCCAAGAGATCAAGAATACGAACGAGCTAAGCGAAGAAGTGGCCTTAGAACTTTGATGGATGAAAAACACGTCTATAAGCTGGCCAGCAAGAAAATTAAGAATACCAAAAAGCAAAATGTAGACGTGATTGGGAAGATTGATCAAGTGTTGACTGGAAGAAAGGGAGCCAAGCTTATCACTAAACCAAGAAAACAGCAGATTCCCACTTCTGACAAATTCGAAGTTTTGAATGAAGCAGAACAAGAAAGGATTAGCTTGTTCAGAGAAACAGATGCACACATCATTAGCCCCAGTGAACAAGTATATGTGGATGCGACTGAACCATTGGATGTGAAGCGCCAACCCCATAAAGAATCTGAACTACCGCCTACATTCTCCAGTTCTGTTGGTGGTGAACTTCAAAGCCAACAAGATTTGGTAGTAACAGTTCCCAGTGATTTGCATTGCCAAGATGTGTTATCATTGCAAGATCCTGTTGCAGCAGATGAAAGATTCGTGACTGGTGAGGTTGCATTACAGAAAACAAATGGAATTCTGGAAGACAGATTGCGTGTTAAGCACTCAAACCTAGAAGATCAGAATATTTGTGAAAAAAGCTTCCAACAGCCACTAACAGAAAGTGAAAACTGCCTCAAGTGGATTCTGGTCATGAGTCAACTATTCGTCAACACTGCAGAAGGACTTTTCAAACTGAACATCCCGTTTAACGTTCTTCAAGGTGGTGGTCGGGAGATTCAAGACGAAGGTAGCAAACTTATATTAGATTGTGGATATGAAGTGATGAAAAGAAAGGGGATAAGGCAAGAACTCAAAAGAGTTCATAGTTATTCGAGGATATCAATGGGTACCACCAACATAATATCCTTTGATGAGTTAGTTAGGCAGCTGAATAAAGACATGGAGAAGATCAAGTTCTACGGTAGGAAAACAAGGTGCCAAGTCGATGTTGAGGACTACCTACCTAAAATGCTTGAACATGATGTTTATGACAAAGATCCAGACGTGAACTGCATGTGGGATTTAGGTTGGAATGATGAGACAGTTGCATTTATCGAGAAATACGATGTTATAAGGGATACGGAAAAGAATATTCTTAGTGTTCTACTGGATGAGATCACCCTAGATTTTTGCACGTTCAATCATACACCGATACAGTAG 3126 0.4053 MAKRSDFAQKLLDDLRLRKQRMASSQTSHQSHHFPIDAYAYTKQAYRGSRNTKANEIVTSRTGVTLNSSSRSHRSVNNGQVSNQMVPYGKGQSSRLTGDMSLALAFALENGGKLKRSDSIMGFLHQINRGTLEFSVPERQVASTSNYPIQINEISKGAHKLNQILRACTNGLNMDTYSIQFAKELLQGAIDLEESLRMLVDLQNNSQFMITSQKKNRITLLEEDNDDNDDTGMEMQLTRSTFSFDKHTTQNTQQIGKATFMQRPISLTSSKEDSNSNNENKTVTRQVSQKRSTKTSSISTSGIKNVNANSEGKNQTASNPEKGRIPNVIAKLMGLDILPDRGEMDSKHVMLQKREGISPKHTAKGRTKKTELQRKETDNLVPIKEQKDIEAFKTPATKGEEMMSGANTNFLVEKTSSGLSLQNGKPLLRDQDGIKTLKEFDKQTKSSAEKNLTRDGQNYVQGIIKKKDHPNNNNREHKGTIRGRTDYPVLNNMLSQLEQVKERSEVKPSIQPEKVVNANNVQPEKRHTNKNITNNEKKSRNNNGIQKTHVVSKNGLHEEKHRREQLQVKEEQMLMMRPQGGSEISSKNSPKSPPSQKKQLSMNQGFKKNSGEKNVAAMKSEGLLTNHYNLVRDEASNYTNEKVKEIVHRKSGQISSPRDQEYERAKRRSGLRTLMDEKHVYKLASKKIKNTKKQNVDVIGKIDQVLTGRKGAKLITKPRKQQIPTSDKFEVLNEAEQERISLFRETDAHIISPSEQVYVDATEPLDVKRQPHKESELPPTFSSSVGGELQSQQDLVVTVPSDLHCQDVLSLQDPVAADERFVTGEVALQKTNGILEDRLRVKHSNLEDQNICEKSFQQPLTESENCLKWILVMSQLFVNTAEGLFKLNIPFNVLQGGGREIQDEGSKLILDCGYEVMKRKGIRQELKRVHSYSRISMGTTNIISFDELVRQLNKDMEKIKFYGRKTRCQVDVEDYLPKMLEHDVYDKDPDVNCMWDLGWNDETVAFIEKYDVIRDTEKNILSVLLDEITLDFCTFNHTPIQ 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04243 1041 Pfam DUF761-associated sequence motif 324 341 IPR032795 -
Vian1g04243 1041 MobiDBLite consensus disorder prediction 240 325 - -
Vian1g04243 1041 MobiDBLite consensus disorder prediction 524 549 - -
Vian1g04243 1041 MobiDBLite consensus disorder prediction 66 92 - -
Vian1g04243 1041 MobiDBLite consensus disorder prediction 240 322 - -
Vian1g04243 1041 MobiDBLite consensus disorder prediction 579 610 - -
Vian1g04243 1041 PANTHER OS01G0228800 PROTEIN-RELATED 8 1033 - -
Vian1g04243 1041 MobiDBLite consensus disorder prediction 578 612 - -
Vian1g04243 1041 MobiDBLite consensus disorder prediction 535 549 - -
Vian1g04243 1041 MobiDBLite consensus disorder prediction 468 483 - -
Vian1g04243 1041 MobiDBLite consensus disorder prediction 464 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04243 Vian-Chr1 65288792 65293913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04243 1 530 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 32.051 8.70e-52 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04243 - - pvu:PHAVU_002G333000g 1700.26