Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04231 ATGGATTCTCATCTCTTTGATCAAGATAAGAAGAAAACATGGAAGCAAACAATTCTGCTATCGTTTCAAATTGTGGGAATAGTTTATGGTCAACTGAGCACGGCACCTTTATATGTATTTGGGACAATGCGAGAGAGCGATCTTGCAGCAGATCAGGAAGTTGTTTATGAACTCTTCTCCTTTATTTTCTGGACGCTCACCATAATTTCCTTGCTGAAGTATGCCTCCATAGTGTTGAAAGCTGATGATGAAGGACAGGGTGGCACTGTTGCTTTGTACTCACTGCTGTGTAGAAATGCAAAAGTTGGTCTACTCCCATGTGACACAAGTGCAAACGAGGTTATGCTTTACGAGGAGAAAAGTTCTCCCAAGATCAAAGCCGATTCAAGAGCACGAAGGGCCATTGAGAAACACAAGATCTGTCACTATTTAATATTGTTCTTAGCTCTCTTCGGTTCCTGCATGACTATTGGGGACGCAGTGCTCACTCCAGCCCTTTCAGTGTACTCAGCTTCAGCAGGAGTTCAGAGATCCTTGACAGACATATTGAAAGACATATTTGGCTCGTCAGAACATACTAAGGAGTCCGTGTCAAAGGCTCTAAAAGCATATGTACCTGTTCCCTCTGCGTGTGTTATATTGGTTGGCCTGTTCATGCTGCAGCATTGCGGTACACGTAAAATTGGGATCATGTTTGCACCAATAATTGCTGCTTGGCTGCTGTTTGTTGCTGCGGTGGGAACGTATAACATTTTCCACTGGGATGTAAAAATCATCTATAAAATATCCCCATTCTACATATACAGATTCATCACAAAAATTGACATCCACAGATGGAGATTGTTAGGGAGCGTCATTTTATGCGTAGCAGGATCGGAGGCAATGTTTGCAGGCCTAGGCCATTTCTCCAAGAAATCAATTAAGATTACATTTATATGCTTCATCTATCCGCTTCTTGTGTTATGCTATGCGGGTCAGGCTGCATACATTTCCAAAAATTTAACTTCTTCTGATTTTAATCATCTTAGCCAATCCATGCCAGGTCAGTGCAAACACTTGTACATAGTGTTATCCCTACTCTCTTCAGCCGTGGGAAGCCAAGCTACCATAACAGCGTGTTTCTCCATCATTAACCAGTGTCTCGCATTGAATTGCTTTCCCAGAGTAAAAGTTATTCACACATCAAAATCTATAAACGGGCAGATTTACATCCCCGATGTCAACTGGCTATTGATGATTTTCAGCCTCACTGTAACTATTGGTTTCAGAGACATTGTGAAAATTGGCAATGCAACAGCATTGGCTATTATAAGTGGAATGCTTGTGACGACGAGTCTGATGTCACTGATCATTGCTTTGTATTGGGAGAAGGACATGATGGTGTCTGTGTACTTTCTTGTATGTTTTGGGTTCATAGAGGCTGCATATCTTTCGGCATGTCTGCTACAGTTCCACAAGGGATCGTGGTATCTGGTTGTCCTATTGGCAGTTTCGATGACAGTGATGCTTTCATGGCACTATGGAAGTATGAAGAAGTACGAGTTTGATTTGCAAAACAAAGTATCAACAGAGTGGCTGATAGATATAAGTCCAGGCCTTGGGATTTCGAGGGTACCCGGAATTGGCTTCATTTACACGGAAATAGTGGAAGGAATCCCAGCTTTCTTTTCACATTTCATCACAAATCTTCCTGCATTCCATCAAGTCTTGATCTTGGTATCATTCAAGTCCGTCCCAGTGCCTTACATAGGAGAAAGTGAGAGGTACCTGATAGGTAGGATCGGGCCAAAGGATTACAAAATATATCGGTGCATTGTGAGAAGTGGATACTGTGATCACATAAGGGACACGGGTGATTTTGAGGAGAAGATTCTTCGTTCAATAGGGGAATTCATATCCATTGAACAGAATGACATTGAGTCGAGGATGAGTTGCCCAGATGAAAGAATGATGCTTGTTGGAGATTCAAGGGATGATGGAAATGGTTTGGTCCCTCTGGAGGATTTACAGTCATCATCATCATCACGCATGGTGCAAAGCCAGGTGAACAACGAATCTCAGATAAGCCCGGTGGCAGAAGAGGCGATGGAGAGTAGCAGTGGTTGTAAGAAGAGAAAAAAGGTTCGGTTCATGTTGCCTCATAATAGTCCTAAAATGCAGGTATCTGTTAGGAATGAGCTTTTGGAGCTGATCGATGCAAGGGAGAGTGGAAGTGCATATTTCTTGGGGCAGTCACATTTAGTTGTGCGTGATGGCTCAAACTTTCTCAAGAGATTCTTAATAATGGTCTATCGTTTCAGTGAAAAAAATTCTCGAGAACCTCCTGTGGCTCTTAAAATCCCTCATGCTGCTCTTGTGGAAGTTGGTGTCGTATGTACTATATAG 2385 0.4243 MDSHLFDQDKKKTWKQTILLSFQIVGIVYGQLSTAPLYVFGTMRESDLAADQEVVYELFSFIFWTLTIISLLKYASIVLKADDEGQGGTVALYSLLCRNAKVGLLPCDTSANEVMLYEEKSSPKIKADSRARRAIEKHKICHYLILFLALFGSCMTIGDAVLTPALSVYSASAGVQRSLTDILKDIFGSSEHTKESVSKALKAYVPVPSACVILVGLFMLQHCGTRKIGIMFAPIIAAWLLFVAAVGTYNIFHWDVKIIYKISPFYIYRFITKIDIHRWRLLGSVILCVAGSEAMFAGLGHFSKKSIKITFICFIYPLLVLCYAGQAAYISKNLTSSDFNHLSQSMPGQCKHLYIVLSLLSSAVGSQATITACFSIINQCLALNCFPRVKVIHTSKSINGQIYIPDVNWLLMIFSLTVTIGFRDIVKIGNATALAIISGMLVTTSLMSLIIALYWEKDMMVSVYFLVCFGFIEAAYLSACLLQFHKGSWYLVVLLAVSMTVMLSWHYGSMKKYEFDLQNKVSTEWLIDISPGLGISRVPGIGFIYTEIVEGIPAFFSHFITNLPAFHQVLILVSFKSVPVPYIGESERYLIGRIGPKDYKIYRCIVRSGYCDHIRDTGDFEEKILRSIGEFISIEQNDIESRMSCPDERMMLVGDSRDDGNGLVPLEDLQSSSSSRMVQSQVNNESQISPVAEEAMESSSGCKKRKKVRFMLPHNSPKMQVSVRNELLELIDARESGSAYFLGQSHLVVRDGSNFLKRFLIMVYRFSEKNSREPPVALKIPHAALVEVGVVCTI 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04231 794 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 8 792 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian1g04231 794 Pfam K+ potassium transporter 22 611 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian1g04231 794 NCBIfam potassium uptake protein 20 794 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04231 Vian-Chr1 65197458 65201391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04231 1 794 Inorganic Solute Cotransporters AT1G70300 44.691 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04231 K03549 K12236 gmx:100801073 1349.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04231 1 65197458 65201391 Vian1g04231 1 65197458 65201391 ECH