Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04199 ATGGGTGGTGGAGGAACGCTCGTGGAAGGGATTCGAAGATTGTTTCAACGACGCGCTTCTAGCTCTGCTGAAAATCAAAACAATGCCAACAATAGCCGCGTCTACGTGAGAGATTTGCGCGCGCAGTTGGCTTCCATTCCCAACCACGACCACCTTGTTGACCCTGATTTCGATTTCTCTACCTTGAAGCCCATCAAAGTTCCCGCACAAATCCCTTTCAGACCCTCTTCTATGGATCATCACAAAAAGGGTGCTCCAGAGTCAGAGTTTTTTACTGAGTATGGAGAGGCGAGTCAATACCAGATCCAAGAGGTTGTTGGAAAAGGAAGTTATGGTGTTGTGGGTTCTGCCGTTGATACTCACACGGGTGAAAGGGTTGCAATCAAGAAAATTAGTGATGTTTTTGAGCATGTATCCGATGCCACACGGATCCTTAGAGAAATTAAGCTCTTGCGGTTGCTTAGACATCCTGATATTGTGGAAATTAAGCATATTATGCTTCCTCCTTCCCGGAGAGAGTTCAGGGATATCTATGTAGTGTTTGAGTTGATGGAATCTGATCTTCATCAAGTAATCAAGGCCAATGATGATCTTACCCCCGAGCACCATCAATTTTTCTTGTACCAACTTCTAAGGGGCCTGAAATATATTCATACAGCAAACGTGTTTCATCGTGATCTGAAGCCAAAAAATATTCTTGCTAACGCTGACTGCAAACTAAAAATATGCGATTTTGGGCTTGCTCGAGTTTCATTCAATGATGCTCCATCAGCTATATTCTGGACTTACACTCCTGCAATTGATATATGGAGCATTGGATGCATATTTGCAGAAATGCTCACTGGGAAGCCATTGTTTCCTGGAAAAAATGTTGTGCACCAATTGGATCTCATGACTGATTTGCTTGGCACTCCTCCTCCAGAGTCCATTGCTAGGATTCGAAATGAAAAGGCCAAAAGGTATCTCAACAGCATGAGAAAAAAGCAACCAATTCCACTATCCCACAAATTTCCAAATGCAGATCCATTGGCTCTCCGGTTACTGGAACGGCTACTTGCATTTGATCCTAAAGACCGTCCATCAGCTGAAGAGGCACTAGCTGATCCTTACTTCATTGGTTTGGCGAACATAGACCGTGAACCATGCACTCTACCCATTTCAAAACTTGAGTTTGAATTTGAGAGAAGGAAATTGACCAAAGATGATGTCAGAGAGTTGATTTATCGAGAGATTTTGGAGTACCATCCCCAAATGCTGCAAGAGCATATTCGTGGTGGAGATCAAACTAGCTTCATGTATCCAAGTGGGGTTGATCGGTTCAAGAGACAGTTTGCACATCTTGAGGAGCATTATGGGAATGGTGAACGAAGCACTCCATTGCAGAGACAGCATGCCTCCTTACCTAGGCAAGTCTTGGTCCAGTTTATTAGTGTCTGTTCTAAGATGAGTTTGGCAGACAAGTCTGTGAACCTTTTCTATGGTACTGTGAGAGTTATATGCAATTTCACTTTATGCAGAGAGAGAGTTTGTGCTCCCAAGGATGAAAGTAAACAACACAACGATATTGAAAATCCAAGTGAAACAAATCTACAGAGTCCTCCAGGGTCTGATGCGACAGGTTCTCAAAATGGAACCTCCAGATCAAACTACAGTGCGCGTAGCTTGTTAAAAAGTGCGAGTATTAGTGCTTCTAAGTGTGTAGTTGTGAAACAAAATAAAGATCCAGAGCAAGAAGCAATTAAGGAGATAAATGATGAGACGATGGATGATGTGACAGATGTTGCTGCCCTCCATGCTTGA 1800 0.4311 MGGGGTLVEGIRRLFQRRASSSAENQNNANNSRVYVRDLRAQLASIPNHDHLVDPDFDFSTLKPIKVPAQIPFRPSSMDHHKKGAPESEFFTEYGEASQYQIQEVVGKGSYGVVGSAVDTHTGERVAIKKISDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPPPESIARIRNEKAKRYLNSMRKKQPIPLSHKFPNADPLALRLLERLLAFDPKDRPSAEEALADPYFIGLANIDREPCTLPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEHIRGGDQTSFMYPSGVDRFKRQFAHLEEHYGNGERSTPLQRQHASLPRQVLVQFISVCSKMSLADKSVNLFYGTVRVICNFTLCRERVCAPKDESKQHNDIENPSETNLQSPPGSDATGSQNGTSRSNYSARSLLKSASISASKCVVVKQNKDPEQEAIKEINDETMDDVTDVAALHA 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04199 599 Pfam Protein kinase domain 100 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g04199 599 CDD STKc_TDY_MAPK 99 416 - -
Vian1g04199 599 MobiDBLite consensus disorder prediction 514 551 - -
Vian1g04199 599 FunFam Mitogen-activated protein kinase 89 194 - -
Vian1g04199 599 Gene3D Phosphorylase Kinase; domain 1 116 417 - -
Vian1g04199 599 MobiDBLite consensus disorder prediction 523 551 - -
Vian1g04199 599 SMART serkin_6 100 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g04199 599 FunFam Mitogen-activated protein kinase 395 417 - -
Vian1g04199 599 FunFam Mitogen-activated protein kinase 184 393 - -
Vian1g04199 599 SUPERFAMILY Protein kinase-like (PK-like) 96 375 IPR011009 -
Vian1g04199 599 Gene3D Transferase(Phosphotransferase) domain 1 186 394 - -
Vian1g04199 599 ProSitePatterns MAP kinase signature. 135 238 IPR003527 GO:0004707|GO:0005524|GO:0006468
Vian1g04199 599 ProSiteProfiles Protein kinase domain profile. 100 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g04199 599 ProSitePatterns Protein kinases ATP-binding region signature. 106 130 IPR017441 GO:0005524
Vian1g04199 599 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 99 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04199 Vian-Chr1 64984200 64988217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04199 85 599 MAP Kinase Gene Family AT3G18040 73.297 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Vian1g04199 Pkinase 8.7e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04199 - - gmx:100780831 946.806