Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04188 ATGGTATACCTGCCTGATTACGTCGAATACCAATATGTTCCTGCACCCCCTCTGCGTTCTTTGTTTCCGATGGCAACTGATGATGCTTTAGATTTGTTATCAAAGATGTTTACATATGATCCAAAAGCTAGAATTTCAGTGCAGCAGGCACTAGAGCATAGGTACTTTTCTTCTGCTCCTCTGCCTTCAGATCCAGACAAGCTCCCTAGACCTGCTCCTAAGAGGGAATCTAAGGCTTCTGATTTCAATTTACAGGAGGGTCCTACTGTATTATCACCTCCAAGGAAGTCTAGGAGAGTGATGCCAGAACGGGATGGGTTTGAAGGAAATTCCCAACAAGCAGATAAGGTTGATGACGGTTTTGGTGATTTCAGACAGACAACTGATGATAATTCAGGCAAGAATGAATCAGCTCCAATGTCTGTAGATTTTTCTATCTTTGGATTAAAACCTCCAAATAGACCTACAATTAACAGTGCTGATAGAACACATTTAAAAAGAAAATTAGATCTAGAATTTCAACAGCCAGAATGA 534 0.4064 MVYLPDYVEYQYVPAPPLRSLFPMATDDALDLLSKMFTYDPKARISVQQALEHRYFSSAPLPSDPDKLPRPAPKRESKASDFNLQEGPTVLSPPRKSRRVMPERDGFEGNSQQADKVDDGFGDFRQTTDDNSGKNESAPMSVDFSIFGLKPPNRPTINSADRTHLKRKLDLEFQQPE 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04188 177 MobiDBLite consensus disorder prediction 160 177 - -
Vian1g04188 177 MobiDBLite consensus disorder prediction 57 177 - -
Vian1g04188 177 MobiDBLite consensus disorder prediction 97 125 - -
Vian1g04188 177 Gene3D Transferase(Phosphotransferase) domain 1 13 72 - -
Vian1g04188 177 SUPERFAMILY Protein kinase-like (PK-like) 10 63 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04188 Vian-Chr1 64883209 64884159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04188 1 174 Core Cell Cycle Gene Families AT1G18040 60.920 1.57e-66 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04188 K02202 - gmx:100786357 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04188 1 64883209 64884159 Vian8g01422 8 33544919 33548566 PCT