Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04158 ATGGCAGAGAGTTCTTCGTCATTGGCTGTGCCCACTTCTCCCACTAAGTATGATGTGTTTCTCAGCTTCAGGGGGGAAGACACACGTCACAACTTCGTCAGTCACCTTCACGCAGCGCTGCACAGGAACCACATCGAAGCATATATTGATGAGAGAGAACAAAAGGGCGAAGAAATTTCGCCTGCACTCCAAACTGCGATAGAAGAATCAAAGATCTATGTCCTTGTTTTCTCCGAAAACTATGCATCTTCGACGTGGTGCTTGAATGAACTGTCTAGTATACTAAACTGCAAGAAGAGATATAGAAGAGACGTGATACCGATTTTCTACAAAGTGGATCCATCAACTGTCAGGAAGCAGGAAAAAAGATACAAAGCAGCTTTCGAAGAGTATGAACAGCGGTTTAAGGACGACATGGACAAAGTGCAAGGATGGAAGGATGCTCTAACCGAAGCTGCTGGACTCTCCGGTTGGGATTCAAACGTTATCAGAGGACATGAGGAAATTGTGGTTGCAGAAAGACTAGAAGATTGTGGTTTCTCTTCTTTAATTGGAATTGATGTTCTCAAAGATAAATGTCTAATATCTGTCTTGGACGGTAGAATTATGATGCACGATCTAATACAAGATATGGGTCAAGAAATTATTCGTAAAGAGTGTCCACAACATCCTGGAAAACGCAGTCGATTGTTGAAAGTTGATGAAATTCATGAGGTTTTAAGTAAGAACAAGGGGTCAGATGCAATACAAAGTATATTAGTAGATGTGGGAAAAATGGAAGAAGTTGAAGTACATGCACAAACTTTCGAAGTGATGAACAATCTTAGGATGCTTATGCTATATTATTCTACTGATATAAATGAAACAAAAGTGTTTCGTGAATCATCTCTTGTAGGTCTTCCAGACACTTTAAAGATTCTTTATTGGACCGGTTTCCCTCAAAGATCTTTACCACCGAACTTTTACCCAGAAAATCTAGTGAGACTCGAAATGCCAAACTGCCATCTTGAACAACTTTGGGAAGGAGATCAGAATTTACCGAAATTGAAAAGGCTCAATCTGAGTGGTTCTCAGAAACTCACCGGGATACCAGACCTTTATCTGTCACCAAATATTGAAGAAATAATTTTCAGTGATTGTCCAAAGTTGATTAAAGTTTACTCTTCCATATTACTCAGCAAGCTCAGTTGTTTATGTTTAGATTCATGTTTGAATTTGAAGAGTGTAACTGTTCCCAGCAATATTCTATCCACATCACCAGGATTGATTCTTTTTTCCGGGTGTGACAAGCTTGAGATGTTTTCCATCGGTCAACCTCATGTGAAACTGAAGCGTCAACGTGAAACTTTCTCAATATTCCCTCGTGAGGAACCGAAGTATCAACGTAGAACTTTCTTAAGATCAAGTTATATTCCGGAGAGGGCTGTATATGATTATTTCTCAACTTGCAGTGACATTTTCTCAATTATTTTCGACAGATATGAGGAAGAAGAAAACGAAGTGACTGATAATAATATATATGAACAAAGTCATACATTGTCGACAGAACTCGAAGAAGGTGTGCCTTTAAACTTTCCAAGTCTCAAGAAGCTCTGTTTCATAAATTTCTTTAACTGTTCTTCCCTTACAACCTTCCCATGTGACCTTTCTGAGACGAAATTCCTGAAGCAACTTTGTCTCTGTCTTTGCTTAAAATTGGAAAATTTCCCCGAAATTGAGGACACGGTGGAAGGTCTAGCGGTTCTCATCTTAGACGGCACAGCCATACAGGCACTACCTTCATCCTTGTGGCGTCTGGTAGGGCTTGAACAACTGAGTTTGCGAGATTGCAAGAATCTTGAGATTATTCCATCTTCCATTGGAAGCCTCACCAGACTATGCAAATTAGACCTTACCTACTGTAAATCACTTCAAACTTTTCCAAGTACCATTTTCAATTTGAAGTTGAGGAAACTTGATTTGTGTGGTTGCTTAAAGTTGAAGACCTTCCCAGAGATCACGGAGCAGGCACAAACTTTTGCTCACATAAACTTAACAGAAACGGCTATCAAAGATCTGCCTTCCTCATTTGGCAATTTGATTAATCTTCGATCCCTGCAGCTCAACAAATGCAGGGATCTCGAATTACTCCCAAACTCTATTGTCAATCTAAAGCATCTCTGTAAACTTGATTGTTCGGGATGTGCCAAATTAACAGAAATCCCAACACACATTGGTAGCCTGTCGTCATTAATGGAACTGTCACTGAGTGAGAGTGGAATCGTGAACCTTCCGGAAAGCATTGCTAATCTTACAAGCTTGAAATCACTTGATTTGAGTGGCTGCAAAAATCTTGAATGCATCCCAAAGATTCCAACGTTTCTAAAACAACTGGTGGCATTGGATTGCCCATCCATTAGACAAGTGAGGTCAAATTCTCTTGTTCAAAACCTCTCAAATTCCAAAGAGAGTTTCTTCAATTTTCATTTGACCAATGCTCAACAACTGGATTCGGGTGCTCGTGCTAACATTGAGGAGGATGCAAGGCTTAGGATGAGCAACGATGCATATAGGTCTGTGTTTTTCTGTTTTTCAGGGAGTGCAATTCCTCATTGGTTTCGTTTTCGTGGCAAGGGACGTTCAGTGACTATAAATGAAGATTTAAGCTTCTGCAACGATGATAGGGTCATTGGTTTCGCTTTGTGTGTTGTTTTTGGACTGTTAGATACGAATGATATTGAAGCTAGACGTGGTTATTTTAGTTACAGCCTAAAATTTGAATCTGATGACGGTGGCACACACATTATTCCAAATAATGATTTGTTAAAAAGCTATTTCAAATGGAATGGTGAAGAGAGACCTATTGATCAAGATCACACATTCATGTGGAAATTTAACTTGGAGTCCCTAAAGACGAGCAGCATGAGCCTTAGACTCTGTGATGCTAGCAGCTTCACTTTTGAGATCAATCCGCTTGATTTTGACTTTCGGTGGCCAAATTACGACTCAGTTGTGGGAGAGTTCAAATCAGTTGTCACAATAAAAGAATGCGGCATATGCCCTCTTTATAGAAGCGGAAGCAATGTTACAGAGTCTTGA 3078 0.399 MAESSSSLAVPTSPTKYDVFLSFRGEDTRHNFVSHLHAALHRNHIEAYIDEREQKGEEISPALQTAIEESKIYVLVFSENYASSTWCLNELSSILNCKKRYRRDVIPIFYKVDPSTVRKQEKRYKAAFEEYEQRFKDDMDKVQGWKDALTEAAGLSGWDSNVIRGHEEIVVAERLEDCGFSSLIGIDVLKDKCLISVLDGRIMMHDLIQDMGQEIIRKECPQHPGKRSRLLKVDEIHEVLSKNKGSDAIQSILVDVGKMEEVEVHAQTFEVMNNLRMLMLYYSTDINETKVFRESSLVGLPDTLKILYWTGFPQRSLPPNFYPENLVRLEMPNCHLEQLWEGDQNLPKLKRLNLSGSQKLTGIPDLYLSPNIEEIIFSDCPKLIKVYSSILLSKLSCLCLDSCLNLKSVTVPSNILSTSPGLILFSGCDKLEMFSIGQPHVKLKRQRETFSIFPREEPKYQRRTFLRSSYIPERAVYDYFSTCSDIFSIIFDRYEEEENEVTDNNIYEQSHTLSTELEEGVPLNFPSLKKLCFINFFNCSSLTTFPCDLSETKFLKQLCLCLCLKLENFPEIEDTVEGLAVLILDGTAIQALPSSLWRLVGLEQLSLRDCKNLEIIPSSIGSLTRLCKLDLTYCKSLQTFPSTIFNLKLRKLDLCGCLKLKTFPEITEQAQTFAHINLTETAIKDLPSSFGNLINLRSLQLNKCRDLELLPNSIVNLKHLCKLDCSGCAKLTEIPTHIGSLSSLMELSLSESGIVNLPESIANLTSLKSLDLSGCKNLECIPKIPTFLKQLVALDCPSIRQVRSNSLVQNLSNSKESFFNFHLTNAQQLDSGARANIEEDARLRMSNDAYRSVFFCFSGSAIPHWFRFRGKGRSVTINEDLSFCNDDRVIGFALCVVFGLLDTNDIEARRGYFSYSLKFESDDGGTHIIPNNDLLKSYFKWNGEERPIDQDHTFMWKFNLESLKTSSMSLRLCDASSFTFEINPLDFDFRWPNYDSVVGEFKSVVTIKECGICPLYRSGSNVTES 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04158 1025 Pfam C-JID domain 857 1018 IPR045344 -
Vian1g04158 1025 Gene3D Ribonuclease Inhibitor 509 652 IPR032675 -
Vian1g04158 1025 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 647 796 IPR044974 GO:0006952
Vian1g04158 1025 Gene3D Ribonuclease Inhibitor 240 424 IPR032675 -
Vian1g04158 1025 Gene3D Ribonuclease Inhibitor 653 815 IPR032675 -
Vian1g04158 1025 SMART till_3 16 155 IPR000157 GO:0007165
Vian1g04158 1025 ProSiteProfiles TIR domain profile. 15 177 IPR000157 GO:0007165
Vian1g04158 1025 SUPERFAMILY L domain-like 204 436 - -
Vian1g04158 1025 Pfam Leucine Rich Repeat 325 344 IPR011713 -
Vian1g04158 1025 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 158 IPR035897 -
Vian1g04158 1025 SUPERFAMILY L domain-like 479 813 - -
Vian1g04158 1025 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 178 - -
Vian1g04158 1025 Gene3D - 14 177 IPR035897 -
Vian1g04158 1025 Pfam TIR domain 16 159 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04158 Vian-Chr1 64623663 64632440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04158 602 770 WRKY Transcription Factor Family AT4G12020 38.462 8.66e-19 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04158 - - vun:114178119 1330.47