Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04157 ATGGAAGGATGCTCTAACCGAAGCTGCTGGACTCTCCGGTTGGGATTCAAACGTTATCAGAGTTTACCGAAGTTGAAAAGGCTCGACCTGAGTTATTCTGAGAAACTTACTAGAATACCAGACCTTTCCCAGTCACCAAATATTGAAGAAATAATTCTCAGTCATTGTCCAAAGTTGATTAAAGTTCACTCTTCCATATTACTCACCAAGCTCACTTCTTTACGTTTAGATAGATGTTATAATCTCAATAGTGTAACTGTTCCCAGCAATATTCTATCTAGATCACCAGGATCCATTAATCTTTCATGTTGTTCGAATCTTGAAATGTTTTCAACCAGTCAAACCCCAATATCTTATTCTCCACCATCGTCATCATTAATTGGTCCAATATTCCCTCATGTGAAACTGGGGCGTCAATTGCAACGTGGGCATTCCATAGAGGCGCACTCGGCTACAAGTGAAAATCCCTCAAGATCGTATTACAGTAGAATTTTCTCCATTACTTATTGGGAAGCGGATGAAGAAAAAGAAGTGACTAATAATAATATATACCTATATGATGAAATGTCGGAACAACTCTTTGAAGGTGTGTCCTTAAATTTTCGAAGTCCCAAGGAGCTCTGTTTCTTAGATCTCTCGAACTGTTCTTCCCTTACAATATTTCCATTTGACCTTTCTGAGATGAAATTCCTAAAGGAACTTTATCTCAGTGGTTGCTCAAAATTGGAATATTTCCCAGAGATTGAGGATACGATGGAAAATTTGGCGGTTCTAATCTTAGACGACACAGCCATACAGGCACTACCTTCATCCTTGTGGCGTTTGGTAGGGCTTCAACAACTGAGTTTGCGGGATTGCAGGAATCTTGAGATTATTCCATCTTCCATTGGAAGCCTCACCAGACTATGCAAGTTAGACCTTACCTACTGTGAATTACTTCAAAGTTTTCCAAACACCATTTTCAAATTGAAGTTGAGGAACCTTGATTTGTGTGGTTGCTTTAAGTTGAGGACCTTCCCAGAGATCACGGAGCCGACACAAACTTTTACTCATATAAATTTAACAGAAACGGCTATCAAATATCTGCCTTCCTCATTTGACAATTTGGTTAATCTTCGATCCCTGCAGCTCAACAAATGCAGGGATCTCGAATCACTCCCAAACTCCATTGTTAATCTAAAACATCTCTGTAAACTTGATTGTTCGGGGTGTGCCAAATTAACAGAAATCCCAACGCACATTGGTAGCCTCTGGTCATTAATGGAACTGTCACTGAGTGAGAGCGGAATCGTGAACCTTCCTGAAAGCATTGCTCATCTTTCAAGCATGATATTACTTGATTTAAGCGACTGCAAAAATCTTGAATGCATCCCACAGATTCCACTGTTTCTAAAACAACTGGTGGCATTGGATTGCACATCAATTAGAAGAGTGATGTCAAATCGAAACCTCTCAGATTCAAAGGAGGATGTCTTCATATTTCATTTGACCAATGCCCAACAACTGGATTTAGGTGCTCGTGCTAACATTGAGGAGGATGCAAGGCTCAGGATGACCCACGATGCATATACGTCTGTGTTCTTCTGTTTTCCAGCGAGTGCAATTCCTCATTGGTTTCCTTTTCGCAGCGAAGGACCTTCAGTGACTATAAATGAAGATTTAAGTTTCTGCAGCGATGGCAGGCTCATTGGTTTCGCTTTGTGTGTGGTTTTTGGAGTGTTAGATACGAATGATATTAATAGCAGATACAGTTCTTTTGTTTACAGCCTAACATTTGAATGTGATGATGATGGCACACAGATAATTCCAAATAGTAATGTGTTAGATAACTATTTCCCAGGGCGTTATAGTCACAGAGTCCTTGATAAAGATCACATATTTATGTGGAAATTTAACTTGGAGAGCCTAAGGGGGAGCAGCATGAACCTTAGGCTCTGTGATGCTCGCAGCTTCACTTTTGAGATCGATTATAACTTTGAGTTTGAGTGGTCAGATTACGTCTCCTTTGTGACAATAAAAGAATGCGGAATGTGCCCTCTTTATAGCAGCGAAAGCAATGTTGCAGAATCTTCAAGGTAA 2079 0.4007 MEGCSNRSCWTLRLGFKRYQSLPKLKRLDLSYSEKLTRIPDLSQSPNIEEIILSHCPKLIKVHSSILLTKLTSLRLDRCYNLNSVTVPSNILSRSPGSINLSCCSNLEMFSTSQTPISYSPPSSSLIGPIFPHVKLGRQLQRGHSIEAHSATSENPSRSYYSRIFSITYWEADEEKEVTNNNIYLYDEMSEQLFEGVSLNFRSPKELCFLDLSNCSSLTIFPFDLSEMKFLKELYLSGCSKLEYFPEIEDTMENLAVLILDDTAIQALPSSLWRLVGLQQLSLRDCRNLEIIPSSIGSLTRLCKLDLTYCELLQSFPNTIFKLKLRNLDLCGCFKLRTFPEITEPTQTFTHINLTETAIKYLPSSFDNLVNLRSLQLNKCRDLESLPNSIVNLKHLCKLDCSGCAKLTEIPTHIGSLWSLMELSLSESGIVNLPESIAHLSSMILLDLSDCKNLECIPQIPLFLKQLVALDCTSIRRVMSNRNLSDSKEDVFIFHLTNAQQLDLGARANIEEDARLRMTHDAYTSVFFCFPASAIPHWFPFRSEGPSVTINEDLSFCSDGRLIGFALCVVFGVLDTNDINSRYSSFVYSLTFECDDDGTQIIPNSNVLDNYFPGRYSHRVLDKDHIFMWKFNLESLRGSSMNLRLCDARSFTFEIDYNFEFEWSDYVSFVTIKECGMCPLYSSESNVAESSR 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04157 692 Gene3D Ribonuclease Inhibitor 345 513 IPR032675 -
Vian1g04157 692 Gene3D Ribonuclease Inhibitor 184 344 IPR032675 -
Vian1g04157 692 Gene3D Ribonuclease Inhibitor 7 135 IPR032675 -
Vian1g04157 692 Pfam C-JID domain 530 685 IPR045344 -
Vian1g04157 692 SUPERFAMILY L domain-like 19 122 - -
Vian1g04157 692 SUPERFAMILY L domain-like 189 514 - -
Vian1g04157 692 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 355 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04157 Vian-Chr1 64581302 64588505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04157 278 443 WRKY Transcription Factor Family AT4G12020 36.747 3.86e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04157 - - var:108318828 1149.81