Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04155 ATGAATGAAATTAAGTCCTTATTACATCTTGAATCACCTGATATTCGGATCATAGGAATTTGTGGTATGGGAGGAATTGGAAAAACTACAATTTCTAAGCAAATATATCATACATTGGCATTAAAGTTTGATTCCAGCAGCCTTGTTTTAGACATTCATGAAAAAATAAGAAGAGATGGAATAGAATATATCATAATCAAATATCTCTCTGAGCTTCTAAAGGAAGCACCTTCATCTCAGTTATTCTATTATCGCGAAAGGCTCAAACGGACAAAGGTTTTTCTCATTCTTGATGACGTTACCGATTCAACTCAACTTGGAAGATTAATGGAAGGGCATGATAATTTTGGGCATGGCAGTAGAATCATCGTGACCAGTAGAGATAGACAAGTTCTTAAAAATGCTAGAGTTGATGATATCTTCGAAGTTAAGGAGTTGAACTTTCATGATTCTCTAAAACTTTTTAGTTTACATGCTTTTAAACAAAACTATTCACAAGAAAGTACTTATATGGACTTGTCAATAAAGATGTTGAGATATGCAAAAGGGATTCCGTTAGCTCTCCAGGTTTTGGGCTCATTGCTTTATGACAGACCAAAAGAAGCATGGGAAAGTCAGTTGCAAAAGTTGGAAAAGTGCCAAGATCTTAAAATTTTCGATGTATTAAAATCAAGTTATGATGAGCTTGATGAGGAGCAGAAAAACATATTTCTTGACATAGCTTGCTTTTATAGAGGACATGAGGAGACTGTGATGGCAGAAAGACTAGATGACTGTGATTTCTCTTCTAAGATTGAAATGGATGTTCTCAAAGATAAGTGTCTAATATCTGTCGTTGATGGTAGAATTGTGATGCACGATCTAATACAAGAAATGGGTCAAGAAATTGTTCGTAAAGAGTGTCCTCAACATCCTGGAAAACGAAGCCGATTATCGAAGACTGAGGAAATTTGTGAGGTTTTAAGAAATAACAAGGGATCAGATGCAATACAATGTATATTAGCAGATATGAGCAAAATGAAAAGGTTCAAAGTACATGCACAAGCTTTTGAAATGATGAATAATCTTAGGATGCTTATGTTCTATTATTCATCAAATAATGTGTTTGATGTATCATCTCTTGTAAGTCTACCAGAGACTTTAAAGATTCTTTATTGGGCTGGTTTTCCTCAAAGATCTTTGCCATCAAATTTTTGCCCACAAAATCTAGTGAGATTTGAAATGCCAAGCTGCAGTCTTGAACAACTCTGGGAAGGAGACCAGAATTTACCGAAGTTGAAAAGACTTAACCTAAGTTGTTCTCCGAAACTTACAAGAATACCAGACCTTTCTCTGTCACCAAATATTGAAGAAATAATTCTCAGTGGTTGTGAAAAGTTAATTAAAGTTCACTCTTCGAGATTCCTCAGCAAGCTCAGTTGTTTAAGTTTAGATAGATGTGATAATCTCAATAGTGTAACTGTTCCCAGCAATATTCTATCCAGATCACCAGGATTCATTCTTCTTTCCTGGTGTCGCAAGCTTGAAATGTTTTCAACCACTCAAACCCAAATATCTTATTCTCCACAATCATCATCATTAATCGGTTCAAGATTCCGTCGTGTCGGGCGTAACTCTCGGGCTACTGGCCCAAGACCCAGTGAAATTTTCTCCATTACTTTTGACCGATATTGGGGAGAAGATGAAGAAGATGTAGCTAATAATAATATATTCTCACAAGGTGAAAAAGTGTCGACTAAACTCATGGAAAGTGTACCCTTAAACTTTCAAAGTCTCAAGAAGCTCTGTTTCATAGATCTCTCGAACTGTTCTTCCCTTACAATATTTCCATTTGACCTTTCTGAGATGAAATTCCTAAAGAAACTTTGTCTTGGTGGTTGCTCAAAATTGGAAAACTTCCCCGAGATTGAGGACACGATGGAAAATTTAGCGGTTCTAATCTTAGACCACACAGCCATACAGGCACTACCTTCATCCTTGTGGCGTTTGGTAGGGCTTCAACAACTGAGTTTGCGCAGTTGCATGAATCTTGAGATTATTCCATCTTCCATTGGAAGGCTCACCAGACTATGCAAGTTAGACCTTACCTACTGTGAATCACTTCAAACTTTTCCAAGCACCATTTTCAAATTGAAGTTGAGGAAACTTGATTTGAGTGGTTTCTTAAGGTTAAGGACCTTCCCAGAGATCACGGAGAAGGCACAAACTTTTTCTCACATAAACTTAACAGAAACGGCTATCAAAGATCTGCCTTCCTCATTTGGCAATTTGGTTAATCTTCGATCCCTACAGCTCAACAAATGCAGGGATCTCGAATCACTCCCAAACTCTATTGTTAATCTAAAGCATCTCTGTAAACTTGATTGTTCGGGGTGTTTCAAATTAACAGAAATCCCAACACACATTGGTAGCCTGTCGTCATTAATGGAACTGTCACTGAGTGAGAGCGGAATCGTGAACCTTCCTGAAAGCGTTGCTCATCTTTCAAGCTTGAAATCACTTGATTTGAGTGACTGCAAAAATCTTGAATGCATCCCACAGATGCCACCGTTTCTAAAACAACTGGTGGCATTGGATTGCCCATCCATTAGACAAGTGATGTCAAATCGAAACCTCTCAGAGTCGAAGGAGGGTGTCTTCAAATTTCATTTCACCAATGCCCAACAACTGGATTCAGGTGCTCGTGCTAACATTGAGGAGGATGCAAGGCTCAGGATGACCCACGATACATATAGCTCTGTGTTCTTCTGTTTTCCAGGGAGTGTTGTTCCTCATTGGTTCCCTTTTCACAACGAAGGACCTTCAGTGAATATAAATGAAGATTTAAGTTTCTGCAGCGATGAGAGACTCATTGGTTTCGCTTTGTGTGTGGTTTTCGGAGTGTTAGATACTAATGTTATTAAAAGCAGATGCGGTTCTTTTGGTTACCGCCTAAAATTTGAATGTGATGATGATGGCACACAGATAATTCCAAATAATGATGCGCTAAACAACTATTTCAAATGGGGTTATAGTCGCAGACTCCTTGATAAAGATCACACATTTATGTGGAAATTTAACTTGGAGAGTCTAAGGAGGAGCGGCATGAACCTTAGGTTCTGTGATGCTCGCAGCTTCACTTTTGAGATCAGTCCATATGATTATAACTTTCAGTGGCCAGATTACGACTCAGTTGTGAATGAGTTAAAATCAGTTGTGACAATAAAAGAATGCGGAATGTGCCCTCTTTATAGCACCGGAAGCAATGTTGCAGAGTCTTCAAAGGAGGATAGGAAGAGGAAGGCAGAAAGCTACTTAGTGGGCTAG 3306 0.3835 MNEIKSLLHLESPDIRIIGICGMGGIGKTTISKQIYHTLALKFDSSSLVLDIHEKIRRDGIEYIIIKYLSELLKEAPSSQLFYYRERLKRTKVFLILDDVTDSTQLGRLMEGHDNFGHGSRIIVTSRDRQVLKNARVDDIFEVKELNFHDSLKLFSLHAFKQNYSQESTYMDLSIKMLRYAKGIPLALQVLGSLLYDRPKEAWESQLQKLEKCQDLKIFDVLKSSYDELDEEQKNIFLDIACFYRGHEETVMAERLDDCDFSSKIEMDVLKDKCLISVVDGRIVMHDLIQEMGQEIVRKECPQHPGKRSRLSKTEEICEVLRNNKGSDAIQCILADMSKMKRFKVHAQAFEMMNNLRMLMFYYSSNNVFDVSSLVSLPETLKILYWAGFPQRSLPSNFCPQNLVRFEMPSCSLEQLWEGDQNLPKLKRLNLSCSPKLTRIPDLSLSPNIEEIILSGCEKLIKVHSSRFLSKLSCLSLDRCDNLNSVTVPSNILSRSPGFILLSWCRKLEMFSTTQTQISYSPQSSSLIGSRFRRVGRNSRATGPRPSEIFSITFDRYWGEDEEDVANNNIFSQGEKVSTKLMESVPLNFQSLKKLCFIDLSNCSSLTIFPFDLSEMKFLKKLCLGGCSKLENFPEIEDTMENLAVLILDHTAIQALPSSLWRLVGLQQLSLRSCMNLEIIPSSIGRLTRLCKLDLTYCESLQTFPSTIFKLKLRKLDLSGFLRLRTFPEITEKAQTFSHINLTETAIKDLPSSFGNLVNLRSLQLNKCRDLESLPNSIVNLKHLCKLDCSGCFKLTEIPTHIGSLSSLMELSLSESGIVNLPESVAHLSSLKSLDLSDCKNLECIPQMPPFLKQLVALDCPSIRQVMSNRNLSESKEGVFKFHFTNAQQLDSGARANIEEDARLRMTHDTYSSVFFCFPGSVVPHWFPFHNEGPSVNINEDLSFCSDERLIGFALCVVFGVLDTNVIKSRCGSFGYRLKFECDDDGTQIIPNNDALNNYFKWGYSRRLLDKDHTFMWKFNLESLRRSGMNLRFCDARSFTFEISPYDYNFQWPDYDSVVNELKSVVTIKECGMCPLYSTGSNVAESSKEDRKRKAESYLVG 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04155 1101 SMART LRR_typ_2 687 711 IPR003591 -
Vian1g04155 1101 SMART LRR_typ_2 805 828 IPR003591 -
Vian1g04155 1101 SMART LRR_typ_2 640 663 IPR003591 -
Vian1g04155 1101 SMART LRR_typ_2 757 781 IPR003591 -
Vian1g04155 1101 SMART LRR_typ_2 423 447 IPR003591 -
Vian1g04155 1101 PRINTS Disease resistance protein signature 181 195 - -
Vian1g04155 1101 PRINTS Disease resistance protein signature 17 32 - -
Vian1g04155 1101 PRINTS Disease resistance protein signature 87 101 - -
Vian1g04155 1101 PRINTS Disease resistance protein signature 826 842 - -
Vian1g04155 1101 SUPERFAMILY L domain-like 582 863 - -
Vian1g04155 1101 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 583 775 IPR044974 GO:0006952
Vian1g04155 1101 Gene3D Ribonuclease Inhibitor 565 716 IPR032675 -
Vian1g04155 1101 Pfam NB-ARC domain 4 228 IPR002182 GO:0043531
Vian1g04155 1101 Gene3D - 145 230 IPR042197 -
Vian1g04155 1101 SUPERFAMILY "Winged helix" DNA-binding domain 217 321 IPR036390 -
Vian1g04155 1101 Gene3D Ribonuclease Inhibitor 311 535 IPR032675 -
Vian1g04155 1101 Pfam C-JID domain 918 1078 IPR045344 -
Vian1g04155 1101 SUPERFAMILY L domain-like 357 659 - -
Vian1g04155 1101 Gene3D - 1 140 IPR027417 -
Vian1g04155 1101 Gene3D Ribonuclease Inhibitor 717 901 IPR032675 -
Vian1g04155 1101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 240 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04155 Vian-Chr1 64562040 64566741 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04155 620 876 WRKY Transcription Factor Family AT4G12020 30.075 2.34e-18 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04155 - - vun:114178119 1620.91