Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04154 ATGTCAGGAAGTTCTTCATCATTCCCGGTGTCTACTTCTCCCACTAGGTATGATGTGTTTCTCAGCTTCAGAGGGGAAGACACACGTTACAACTTCATTAGTCACCTTTTTGCAGCGCTGCAGAAAAATCACATCCAAGCATATATTGATGACAGACTACAAAGGGGCGAAGAAATTTCACCTGCACTAAATACTGCAATAGAAGAATCAAAGATATATGTTCTGATCTTCTCCGAAAACTATGCATCTTCGACGTGGTGTTTGAATGAACTGACTAAGATACTGGATTGCAAGAAGAGATATGGAAGGGATGTGATACCCGTTTTCTACAAGGTGGATCCAGCAACTGTCAGGAAACAGGAAAAGAGATACAAAGAAGCATTCGAAGAGCATGAACAGCGGTTTAAGGAAGACATGGACAAAGTGCAAGGATGGAAGAATGCTCTAACTGAAGCTGCTGGACTCGCCGGCCGGGATTCAAACGTTATCAGGTCAGAAAACACACTTGTTGAAGGAATTGTGGAAGATATTTTGAAAAAATTGAATCTTTATTCCATTAGTTATGATGAAGGAATTATTGGCATTGAAAAACATATTGAAAGAATTCGATTCTTGATGCATTTTGAGTCATCAGATATTCGGATCATAGGAATTTGTGGCATGGGAGGAATAGGAAAAACTACAATTTCTCAACAAATACATCACATATTGGCAATGCAATTTGATTCCAGAAGCCTTGTTTTAGACACTCAAAAAAAAATAGAAAGAGATGGAATAGACACTGTCAGAGAAAAATATATGTCTGAGCTTCTAAATGAAGTACCATCCCCTAGTTTATACTACAGTGAAAGACTCAAACGAATGAGGAATCTCATAATTCTTGATGATGTTACTGATTCGGTTCAACTTAAACAATTGTTAAGAAGGCGTGATAGTTTTGGACAAGGCAGTAGAATCATTATAACCAGTAGAGACAAACAAGTGTTAAAGAATGCTGGAGCTGATGACATCTACGAAGTTAAGGAGTTGAATGATCTTGATTCTCTAAAACTTTTTATTTTACATGCTTTTAAACAAAACTCTTCACACGAAGCAACGTACAAGGACTTGACAGAAGAGGTGTTGAGATATGCAAAAGGAATTCCATTAGTTCTCCAAATTTTGGGCTCATTACTTTATGGCAGAACAAGAGAAGCATGGGAAAGTCAGTTACAAAAGTTGAAAAAATGCCAAGATCTTAATATTTTTATTGTGTTAAAATTAAGTTATGATGGGCTTGATGAGGAGCAAAAGAATATATTTCTTGACATCGCTTGCTTTTATAGGGGACACGAGGAGAGTGTGGTAGTAGAAAGACTAGATGACTGTGGTTTTTCTTCTAAGATTGAAATGGATATTCTCAAAGACAGAGGTCTAATATCTATCGTTGATGGTAGAATTGAAATGCACGATCTAATACAAGAAATGGGTCAAGAAATTGTTCGTAAAGAGTGTCCTCAATATCCTGGAAAACGTAGTCGATTGTGGAAGGCTGACGAAATTAACGAGGTTTTGAAAAAGAACAAGGGGTCAGATGCAATTCAAGGTATCTTACTAGATTTGACGAAAATAAAAGAAGTTATAGTACATGGACAAGCTTTACGAAAGATGGATAATCTAAGGATGCTTATACTCTATGATTGTTATGATTGTTTTGATTATGTGCTTCCACTCAAATTCAAAGTGTCCCCTGCTTCATCTCTTGTAATTCTACCAGACACTTTAAAGATTCTTTATTGGAAAGGTTTCCCTCAACGATCTTTACCACCCAACTTTTGCCCAGAAAATCTAGTGAGACTCGAAATGCCAGACTGCCATCTTGAACAACTTTGGGAAGAAGATCAGAGTTTACCGAAGTTGAAAAGGCTCAACCTGGATCATTCTAAGAAACTTACAAGAATACCAGACCTTTCCCTGTCACCAAATATTGAAGAAATAATTCTCAATAATTGTCCAAAGTTGATTAAAGTTCACTCTTCCATATTACTCACCAAGCTCAGTTATTTAGGTTTAGATAGATGTCATGATCTCAATAGTGTAACTGTTCCTAGCAATATTCTATCCAGATCACCAGGATCCATTAATCTTTCCAGGTGTTCGAATCTTGAAATATTTTCAACCAGTCAAACCCAAACATCTTATTCTCCACCATCGTCATCATTAATCGCTCCAATATTCCCTCGCGTCAAACTGGCGCGTCAATTGCAAACTGGATTTTCCTTACTGGATTGCTTGCCTGGACCTGAAAATATCATAAGATCCTATTACGGAAGCATTTTCTCCATTACTTTTGACCGATATTGGGAAGCAGATGAAGAAAAACAAGTGACTAATAATAATATATACGCATATGAGGAAATGCCGATACCACTCACTGGATATGAGCCCTTAAACTTTGGAATTTTGAAGAAGCTCTGTTTCATAGATCTCACAAACTGTTCTGACCTTACAATATTTCTATCTGACCTTTCTGAGATGAAATTCCTAAAGAAACTTTGTCTCCGTGGTTGCTCAAAATTGCAAAATTTCCCCGAGATTGAGGACACGATGGAAAATTTGGCGGTTCTAATCTTAGACGACACAGCCATACAGGCACTGCCTTCATCCTTGTGGCGTTTGGTAGGGCTTGAACAACTGAGTTTGCGAGATTGCAAGAATCTTGAGATTATTCCATCTTCCATTGGAAGCCTCACCAGACTATGCAAATTAGACCTTACCTACTGTAAATCACTTCAAACTTTTCCAAGTACCATTTTCAATTTGAAGTTGAGGAAACTTGATTTGTGTGGTTGCTTAAAGTTGAAGACCTTCCCAGAGATCACGGAGCAGGCACAAACTTTTGCTCACATAAACTTAACAGAAACGGCTATCAAAGATCTGCCTTCCTCATTTGGCAATTTGATTAATCTTCGATCCCTGCAGCTCAACAAATGCAGGGATCTCGAATCACTCCCAAACTCTATTGTTAATCTAAAGCATCTCTGTAAACTTGATTGTTCGGGATGTGCCAAATTAACAGAAATCCCAACACACATTGGTAGCCTGTCGTCATTAATGGAACTGTCACTGAGTGAGAGTGGAATCGTGAACCTTCCGGAAAGCATTGCTAATCTTACAAGCTTGAAATCACTTGATTTGAGTAGCTGCAAAAATCTTGAATGCATCCCAAAGATTCCAACGTTTCTAAAACAACTGGTGGCATTGGATTGCCCATCCATTAGACAAGTGAGGTCAAATTCTCTTGTTCAAAACCTCTCAAATTCCAAAGAGAGTTTCTTCAATTTTCATTTGACCAATGCTCAACAACTGGATTCGGGTGCTCGTGCTAACATTGAGGAGGATGCAAGGCTTAGGATGAGCAACGATGCATATAGGTCTGTGTTTTTCTGTTTTTCAGGGAGTGCAATTCCTCATTGGTTTCGTTTTCGTGGCAAGGGACGTTCAGTGACTATAAATGAAGATTTAAGCTTCTGCAACGATGATAGGGTCATTGGTTTCGCTTTGTGTGTTGTTTTTGGACTGTTAGATACGAATGATATTGAAGCTAGACGTGGTTATTTTAGTTACAGCCTAAAATTTGAATCTGATGACGGTGGCACACACATTATTCCAAATAATGATTTGTTAAAAAGCTATTTCAAATGGAATGGTGAAGAGAGACCTATTGATCAAGATCACACATTCATGTGGAAATTTAACTTGGAGTCCCTAAAGACGAGCAGCATGAGCCTTAGACTCTGTGATGCTAGCAGCTTCACTTTTGAGATCAATCCGCTTGATTTTGACTTTCGGTGGCCAAATTACGACTCAGTTGTGGGAGAGTTCAAATCAGTTGTCACAATAAAAGAATGCGGCATATGCCCTCTTTATAGAAGCGGAAGCAATGTTACAGAGTCTTGA 3939 0.3826 MSGSSSSFPVSTSPTRYDVFLSFRGEDTRYNFISHLFAALQKNHIQAYIDDRLQRGEEISPALNTAIEESKIYVLIFSENYASSTWCLNELTKILDCKKRYGRDVIPVFYKVDPATVRKQEKRYKEAFEEHEQRFKEDMDKVQGWKNALTEAAGLAGRDSNVIRSENTLVEGIVEDILKKLNLYSISYDEGIIGIEKHIERIRFLMHFESSDIRIIGICGMGGIGKTTISQQIHHILAMQFDSRSLVLDTQKKIERDGIDTVREKYMSELLNEVPSPSLYYSERLKRMRNLIILDDVTDSVQLKQLLRRRDSFGQGSRIIITSRDKQVLKNAGADDIYEVKELNDLDSLKLFILHAFKQNSSHEATYKDLTEEVLRYAKGIPLVLQILGSLLYGRTREAWESQLQKLKKCQDLNIFIVLKLSYDGLDEEQKNIFLDIACFYRGHEESVVVERLDDCGFSSKIEMDILKDRGLISIVDGRIEMHDLIQEMGQEIVRKECPQYPGKRSRLWKADEINEVLKKNKGSDAIQGILLDLTKIKEVIVHGQALRKMDNLRMLILYDCYDCFDYVLPLKFKVSPASSLVILPDTLKILYWKGFPQRSLPPNFCPENLVRLEMPDCHLEQLWEEDQSLPKLKRLNLDHSKKLTRIPDLSLSPNIEEIILNNCPKLIKVHSSILLTKLSYLGLDRCHDLNSVTVPSNILSRSPGSINLSRCSNLEIFSTSQTQTSYSPPSSSLIAPIFPRVKLARQLQTGFSLLDCLPGPENIIRSYYGSIFSITFDRYWEADEEKQVTNNNIYAYEEMPIPLTGYEPLNFGILKKLCFIDLTNCSDLTIFLSDLSEMKFLKKLCLRGCSKLQNFPEIEDTMENLAVLILDDTAIQALPSSLWRLVGLEQLSLRDCKNLEIIPSSIGSLTRLCKLDLTYCKSLQTFPSTIFNLKLRKLDLCGCLKLKTFPEITEQAQTFAHINLTETAIKDLPSSFGNLINLRSLQLNKCRDLESLPNSIVNLKHLCKLDCSGCAKLTEIPTHIGSLSSLMELSLSESGIVNLPESIANLTSLKSLDLSSCKNLECIPKIPTFLKQLVALDCPSIRQVRSNSLVQNLSNSKESFFNFHLTNAQQLDSGARANIEEDARLRMSNDAYRSVFFCFSGSAIPHWFRFRGKGRSVTINEDLSFCNDDRVIGFALCVVFGLLDTNDIEARRGYFSYSLKFESDDGGTHIIPNNDLLKSYFKWNGEERPIDQDHTFMWKFNLESLKTSSMSLRLCDASSFTFEINPLDFDFRWPNYDSVVGEFKSVVTIKECGICPLYRSGSNVTES 1312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04154 1312 Gene3D - 188 338 IPR027417 -
Vian1g04154 1312 SUPERFAMILY L domain-like 802 1100 - -
Vian1g04154 1312 Gene3D - 14 187 IPR035897 -
Vian1g04154 1312 SMART till_3 16 155 IPR000157 GO:0007165
Vian1g04154 1312 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 157 IPR035897 -
Vian1g04154 1312 Pfam TIR domain 17 184 IPR000157 GO:0007165
Vian1g04154 1312 PRINTS Disease resistance protein signature 215 230 - -
Vian1g04154 1312 PRINTS Disease resistance protein signature 284 298 - -
Vian1g04154 1312 PRINTS Disease resistance protein signature 908 924 - -
Vian1g04154 1312 PRINTS Disease resistance protein signature 378 392 - -
Vian1g04154 1312 Pfam C-JID domain 1144 1305 IPR045344 -
Vian1g04154 1312 SMART AAA_5 212 343 IPR003593 GO:0016887
Vian1g04154 1312 Gene3D Ribonuclease Inhibitor 940 1104 IPR032675 -
Vian1g04154 1312 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Vian1g04154 1312 Gene3D Ribonuclease Inhibitor 461 749 IPR032675 -
Vian1g04154 1312 Pfam NB-ARC domain 196 409 IPR002182 GO:0043531
Vian1g04154 1312 Gene3D - 342 427 IPR042197 -
Vian1g04154 1312 Gene3D Ribonuclease Inhibitor 790 939 IPR032675 -
Vian1g04154 1312 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 998 IPR044974 GO:0006952
Vian1g04154 1312 SUPERFAMILY L domain-like 482 730 - -
Vian1g04154 1312 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Vian1g04154 1312 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 437 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04154 Vian-Chr1 64546713 64552813 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04154 816 986 WRKY Transcription Factor Family AT4G12020 36.842 1.82e-16 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04154 - - vun:114178119 1886.31