Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04153 ATGTCAGGAAGTCCTTCATCAGTCGCCGTGTCTACTTCTCTGACTAAGTACGATGTGTTTCTCAACTTTAGAGGAGAAGACACCCGTGAAAACTTCATCGCTTACCTTTATGCAGAGCTGCAGAGGAAGCACATCGAAGCATATATTGATTACAGACTACAAAGGGGCGAAGAAATTTCACCTGCACTACAAACTGCAATAGAAGAATCAAAGATCTATGTCCTGGTTTTCTCTGAAAACTATGCATCTTCGACGTGGTGTTTAAATGAACTGACTAAAATACTGGAGTGCAAGAAGAAATATGGAAGGGATGTGATACCCGTTTTCTACAAGGTGGATCCATCAACTGTCAGGAAGAAGGAAGAGAGATACAAAGAAGCATTCGAAGAACATGAACTGCGGTTTAAGGGAGACATGGACAAAGTGCAAGGATGGAAGGATGCTCTAACCGAAGCTGCTGAACTCTCCGGCTGGGATTCAAAAGTAACCAGGCCAGAAAACAAACTTGTTGAACAAATTGTAGAAGATATTTTAGGAAAACTGAATCATGATTCCATCAGTTATGATCAAGGAATAGTCGGCACTGAAAAATATATGAATGAAATTAAGTCCTTATTACATCTTGAATCACCTGATATTCGGATCATAGGAATTTGTGGTATGGGAGGAATTGGAAAAACTACAATTTCTAAGCAAATATATCATACATTGGCATTAAAGTTTGATTCCAGCAGCCTTGTTTTAGACATTCATGAAAAAATAAGAAGAGATGGAATAGAATATATCATAATCAAATATCTCTCTGAGCTTCTAAAGGAAGCACCTTCATCTCAGTTATTCTATTATCGCGAAAGGCTCAAACGGACAAAGGTTTTTCTCATTCTTGATGACGTTACCGATTCAACTCAACTTGGAAGATTAATGGAAGGGCATGATAATTTTGGGCATGGCAGTAGAATCATCGTGACCAGTAGAGATAGACAAGTTCTTAAAAATGCTAGAGTTGATGATATCTTCGAAGTTAAGGAGTTGAACTTTCATGATTCTCTAAAACTTTTTAGTTTACATGCTTTTAAACAAAACTATTCACAAGAAAGTACTTATATGGACTTGTCAATAAAGATGTTGAGATATGCAAAAGGGATTCCGTTAGCTCTCCAGGTTTTGGGCTCATTGCTTTATGACAGACCAAAAGAAGCATGGGAAAGTCAGTTGCAAAAGTTGGAAAAGTGCCAAGATCTTAAAATTTTCGATGTATTAAAATCAAGTTATGATGAGCTTGATGAGGAGCAGAAAAACATATTTCTTGACATAGCTTGCTTTTATAGAGGACATGAGGAGACTGTGATGGCAGAAAGACTAGATGACTGTGATTTCTCTTCTAAGATTGAAATGGATGTTCTCAAAGATAAGTGTCTAATATCTGTCGTTGATGGTAGAATTGTGATGCACGATCTAATACAAGAAATGGGTCAAGAAATTGTTCGTAAAGAGTGTCCTCAACATCCTGAAAAACGAAGCCGATTATCGAAGACTGAGGAAATTTGTGAGGTTTTAAGAAATAACAAGGGATCAGATGCAATACAATGTATATTAGCAGATATGAGCAAAATGAAAAGGTTCAAAGTACATGCACAAGCTTTTGAAATGATGAATAATCTTAGGATGCTTATGTTCTATTATTCATCAAATAATGTGTTTGATGTATCATCTCTTGTAAGTCTACCAGAGACTTTAAAGATTCTTTATTGGGCTGGTTTTCCTCAAAGATCTTTGCCATCAAATTTTTGCCCACAAAATCTAGTGAGATTTGAAATGCCAAGCTGCAGTCTTGAACAACTCTGGGAAGGAGACCAGAATTTACCGAAGTTGAAAAGACTTAACCTAAGTTGTTCTCCGAAACTTACAAGAATACCAGACCTTTCTCTGTCACCAAATATTGAAGAAATAATTCTCAGTGGTTGTGAAAAGTTAATTAAAGTTCACTCTTCGAGATTCCTCAGCAAGCTCAGTTGTTTAAGTTTAGATAGATGTGATAATCTCAATAGTGTAACTGTTCCCAGCAATATTCTATCCAGATCACCAGGATTCATTCTTCTTTCCTGGTGTCGCAAGCTTGAAATGTTTTCAACCACTCAAACCCAAATATCTTATTCTCCACAATCATCATCATTAATCGGTTCAAGATTCCGTCGTGTCGGGCGTAACTCTCGGGCTACTGGCCCAAGACCCAGTGAAATTTTCTCCATTACTTTTGACCGATATTGGGGAGAAGATGAAGAAGATGTAGCTAATAATAATATATTCTCACAAGGTGAAAAAGTGTCGACTAAACTCATGGAAAGTGTACCCTTAAACTTTCAAAGTCTCAAGAAGCTCTGTTTCATAGATCTCTCGAACTGTTCTTCCCTTACAATATTTCCATTTGACCTTTCTGAGATGAAATTCCTAAAGAAACTTTGTCTTGGTGGTTGCTCAAAATTGGAAAACTTCCCCGAGATTGAGGACACGATGGAAAATTTAGCGGTTCTAATCTTAGACCACACAGCCATACAGGCACTACCTTCATCCTTGTGGCGTTTGGTAGGGCTTCAACAACTGAGTTTGCGCAGTTGCATGAATCTTGAGATTATTCCATCTTCCATTGGAAGGCTCACCAGACTATGCAAGTTAGACCTTACCTACTGTGAATCACTTCAAACTTTTCCAAGCACCATTTTCAAATTGAAGTTGAGGAAACTTGATTTGAGTGGTTTCTTAAGGTTAAGGACCTTCCCAGAGATCACGGAGAAGGCACAAACTTTTTCTCACATAAACTTAACAGAAACGGCTATCAAAGATCTGCCTTCCTCATTTGGCAATTTGGTTAATCTTCGATCCCTGCAGCTCAACAAATGCAGGGATCTCGAATCACTCCCAAACTCTATTGTTAATCTAAAGCATCTCTGTAAACTTGATTGTTCGGGGTGTTTCAAATTAACAGAAATCCCAACACACATTGGTAGCCTGTCGTCATTAATGGAACTGTCACTGAGTGAGAGCGGAATCGTGAACCTTCCTGAAAGCGTTGCTCATCTTTCAAGCTTGAAATCACTTGATTTGAGTGACTGCAAAAATCTTGAATGCATCCCACAGATGCCACCGTTTCTAAAACAACTGGTGGCATTGGATTGCCCATCCATTAGACAAGTGATGTCAAATCGAAACCTCTCAGAGTCGAAGGAGGGTGTCTTCAAATTTCATTTCACCAATGCCCAACAACTGGATTCAGGTGCTCGTGCTAACATTGAGGAGGATGCAAGGCTCAGGATGACCCACGATACATATAGCTCTGTGTTCTTCTGTTTTCCAGGGAGTGTTGTTCCTCATTGGTTCCCTTTTCACAACGAAGGACCTTCAGTGAATATAAATGAAGATTTAAGTTTCTGCAGCGATGAGAGACTCATTGGTTTCGCTTTGTGTGTGGTTTTCGGAGTGTTAGATACTAATGTTATTAAAAGCAGATGCGGTTCTTTTGGTTACCGCCTAAAATTTGAATGTGATGATGATGGCACACAGATAATTCCAAATAATGATGCGCTAAACAACTATTTCAAATGGGGTTATAGTCGCAGACTCCTTGATAAAGATCACACATTTATGTGGAAATTTAACTTGGAGAGTCTAAGGAGGAGCGGCATGAACCTTAGGTTCTGTGATGCTCGCAGCTTCACTTTTGAGATCAGTCCATATGATTATAACTTTCAGTGGCCAGATTACGACTCTGTTGTGAATGAGTTAAAATCAGTTGTGACAATAAAAGAATGCGGAATGTGCCCTCTTTATAGCACCGGAAGCAATGTTGCAGAGTCTTCAAAGGAGGATAGGAAGAGGAAGGCAGAAAGCTACTTAGTGGGCTAG 3900 0.3877 MSGSPSSVAVSTSLTKYDVFLNFRGEDTRENFIAYLYAELQRKHIEAYIDYRLQRGEEISPALQTAIEESKIYVLVFSENYASSTWCLNELTKILECKKKYGRDVIPVFYKVDPSTVRKKEERYKEAFEEHELRFKGDMDKVQGWKDALTEAAELSGWDSKVTRPENKLVEQIVEDILGKLNHDSISYDQGIVGTEKYMNEIKSLLHLESPDIRIIGICGMGGIGKTTISKQIYHTLALKFDSSSLVLDIHEKIRRDGIEYIIIKYLSELLKEAPSSQLFYYRERLKRTKVFLILDDVTDSTQLGRLMEGHDNFGHGSRIIVTSRDRQVLKNARVDDIFEVKELNFHDSLKLFSLHAFKQNYSQESTYMDLSIKMLRYAKGIPLALQVLGSLLYDRPKEAWESQLQKLEKCQDLKIFDVLKSSYDELDEEQKNIFLDIACFYRGHEETVMAERLDDCDFSSKIEMDVLKDKCLISVVDGRIVMHDLIQEMGQEIVRKECPQHPEKRSRLSKTEEICEVLRNNKGSDAIQCILADMSKMKRFKVHAQAFEMMNNLRMLMFYYSSNNVFDVSSLVSLPETLKILYWAGFPQRSLPSNFCPQNLVRFEMPSCSLEQLWEGDQNLPKLKRLNLSCSPKLTRIPDLSLSPNIEEIILSGCEKLIKVHSSRFLSKLSCLSLDRCDNLNSVTVPSNILSRSPGFILLSWCRKLEMFSTTQTQISYSPQSSSLIGSRFRRVGRNSRATGPRPSEIFSITFDRYWGEDEEDVANNNIFSQGEKVSTKLMESVPLNFQSLKKLCFIDLSNCSSLTIFPFDLSEMKFLKKLCLGGCSKLENFPEIEDTMENLAVLILDHTAIQALPSSLWRLVGLQQLSLRSCMNLEIIPSSIGRLTRLCKLDLTYCESLQTFPSTIFKLKLRKLDLSGFLRLRTFPEITEKAQTFSHINLTETAIKDLPSSFGNLVNLRSLQLNKCRDLESLPNSIVNLKHLCKLDCSGCFKLTEIPTHIGSLSSLMELSLSESGIVNLPESVAHLSSLKSLDLSDCKNLECIPQMPPFLKQLVALDCPSIRQVMSNRNLSESKEGVFKFHFTNAQQLDSGARANIEEDARLRMTHDTYSSVFFCFPGSVVPHWFPFHNEGPSVNINEDLSFCSDERLIGFALCVVFGVLDTNVIKSRCGSFGYRLKFECDDDGTQIIPNNDALNNYFKWGYSRRLLDKDHTFMWKFNLESLRRSGMNLRFCDARSFTFEISPYDYNFQWPDYDSVVNELKSVVTIKECGMCPLYSTGSNVAESSKEDRKRKAESYLVG 1299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04153 1299 SUPERFAMILY L domain-like 555 857 - -
Vian1g04153 1299 Gene3D Ribonuclease Inhibitor 507 733 IPR032675 -
Vian1g04153 1299 Gene3D Ribonuclease Inhibitor 915 1098 IPR032675 -
Vian1g04153 1299 SUPERFAMILY L domain-like 780 1060 - -
Vian1g04153 1299 SMART till_3 16 155 IPR000157 GO:0007165
Vian1g04153 1299 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 438 IPR027417 -
Vian1g04153 1299 PRINTS Disease resistance protein signature 215 230 - -
Vian1g04153 1299 PRINTS Disease resistance protein signature 285 299 - -
Vian1g04153 1299 PRINTS Disease resistance protein signature 379 393 - -
Vian1g04153 1299 PRINTS Disease resistance protein signature 1024 1040 - -
Vian1g04153 1299 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Vian1g04153 1299 SUPERFAMILY "Winged helix" DNA-binding domain 415 519 IPR036390 -
Vian1g04153 1299 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 712 IPR044974 GO:0006952
Vian1g04153 1299 Pfam NB-ARC domain 196 426 IPR002182 GO:0043531
Vian1g04153 1299 Gene3D - 343 428 IPR042197 -
Vian1g04153 1299 SMART LRR_typ_2 955 979 IPR003591 -
Vian1g04153 1299 SMART LRR_typ_2 838 861 IPR003591 -
Vian1g04153 1299 SMART LRR_typ_2 1003 1026 IPR003591 -
Vian1g04153 1299 SMART LRR_typ_2 885 909 IPR003591 -
Vian1g04153 1299 SMART LRR_typ_2 621 645 IPR003591 -
Vian1g04153 1299 Gene3D Ribonuclease Inhibitor 763 914 IPR032675 -
Vian1g04153 1299 Pfam C-JID domain 1116 1276 IPR045344 -
Vian1g04153 1299 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Vian1g04153 1299 Gene3D - 185 338 IPR027417 -
Vian1g04153 1299 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 158 IPR035897 -
Vian1g04153 1299 Pfam TIR domain 16 184 IPR000157 GO:0007165
Vian1g04153 1299 Gene3D - 14 184 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04153 Vian-Chr1 64513562 64519453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04153 791 961 WRKY Transcription Factor Family AT4G12020 37.791 7.35e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04153 - - vun:114178119 1925.6