Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian1g04103 | ATGACCAATTATTTTGAGTCCAAACTGGGACAAGGTGGTTATGGTGAAGTATATAAGGGAAATCTATGCAACAAAGCTCCCGTGGCTGTGAAGCTACTGAATGCTTCCAAGGGAAACGGGGAAGAATTTATCAACGAGGTTATAAGCATCAGTAGAACATCCCATGTAAACATCGTTAATCTCCTTGGTTTTTGTCTTGAAGGCAAGAAGAAGGCTATTATATACGATTTTATGCCAAATGGATCACTTGAAAAGTATATTCCCAACAAGAATTTGGAAACTGATCCACCTTTGAGTTGGCAAAGGCTACACCACATTGCCGAAGGAATAGCCAAAGGATTGGAGTACTTGCACAGAGGCTGCAACACTCGGATATTACATTTTGACATAAAACCAAGCAACATTCTTTTGGACAAAAATTTCTGTCCCAAAATCTCTGATTTTGGGATGGCCAAGCTCTGCTCAAACACACAAAGTATCATATCTATGTATGGTGCTAGAGGGACAGTTGGGTACATAGCTCCAGAGGTGTGGAACAGAAGCTTTGGAGGGGTTTCGTATAAATCTGATGTTTATAGTTACGGAATGATGATTTTGGAAATGGTTGGAGGAAGGCAAAATATCAGCATTGAAGCAAGTCATTCAAGTGAGACATACTTTCCCCATTGGATATACAAGCACGTTGAGGTGGGAAAAAATTTGGCATGGCATGAAGGTATGACCCCAGAGGAAAATGAAATTTGTAAGAAAATGATTATTGTGGGATTGTGGTGCATACAGACAATCCCTTCTGACAGGCCTGCTATGAGTCGGGTGGTTGAAATGTTAGAAGGAAGCACGGATCAATTGCAAATTCCACCCGAGCCATTCATATTTAGTCCTATGAAAACTGAAGTGGATATTTGCACCACTAGTAGCAGCGATTGA | 927 | 0.4078 | MTNYFESKLGQGGYGEVYKGNLCNKAPVAVKLLNASKGNGEEFINEVISISRTSHVNIVNLLGFCLEGKKKAIIYDFMPNGSLEKYIPNKNLETDPPLSWQRLHHIAEGIAKGLEYLHRGCNTRILHFDIKPSNILLDKNFCPKISDFGMAKLCSNTQSIISMYGARGTVGYIAPEVWNRSFGGVSYKSDVYSYGMMILEMVGGRQNISIEASHSSETYFPHWIYKHVEVGKNLAWHEGMTPEENEICKKMIIVGLWCIQTIPSDRPAMSRVVEMLEGSTDQLQIPPEPFIFSPMKTEVDICTTSSSD | 308 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian1g04103 | 308 | SMART | serkin_6 | 3 | 276 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian1g04103 | 308 | ProSiteProfiles | Protein kinase domain profile. | 3 | 291 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian1g04103 | 308 | Gene3D | Transferase(Phosphotransferase) domain 1 | 82 | 286 | - | - | |
Vian1g04103 | 308 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 125 | 137 | IPR008271 | GO:0004672|GO:0006468 | |
Vian1g04103 | 308 | FunFam | PR5-like receptor kinase | 78 | 288 | - | - | |
Vian1g04103 | 308 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 277 | IPR011009 | - | |
Vian1g04103 | 308 | Gene3D | Phosphorylase Kinase; domain 1 | 4 | 81 | - | - | |
Vian1g04103 | 308 | PIRSF | ILK | 4 | 285 | - | - | |
Vian1g04103 | 308 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 1 | 294 | IPR045874 | GO:0004672 | |
Vian1g04103 | 308 | Pfam | Protein tyrosine and serine/threonine kinase | 5 | 276 | IPR001245 | GO:0004672|GO:0006468 | |
Vian1g04103 | 308 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 31 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian1g04103 | Vian-Chr1 | 64063630 | 64064556 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian1g04103 | 1 | 300 | Receptor kinase-like Gene Family | AT5G38280 | 58.224 | 1.00e-122 | 364 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Vian1g04103 | PK_Tyr_Ser-Thr | 9.5e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian1g04103 | - | - | gmx:100781977 | 580.482 |