Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04083 ATGAATTTCCCCTCAGAAGCTACAGAATTGGGCTGCCCAATTGATAGTTCCTTTGAAAATGGGAGTTTTCAATCCCACAATGTTGAGTTGGAAGCCAAAAATCGATTGCTTTTGGTTCAGTGGTTATCTAGCCTTATTCCTTCATTGAAATTTCCACCAAATGTCACGGATGGTGAATTAAGAGCATGCTTGAGTAATGGTACTGTTTTGTGCCAGATACTGAACAAGCTACGACCTGGTATTGTGAATGTGGTTAGTGAACCTGATAATGTTCTGCCATCACAATCAGAAAATGTTAAATCCTTTCTGAAAGTTTTGGATCTAACGGGATTGCTCCGGTTTGAAATCTCAGACCTAGAAAAGGGGTCTATGAAAGCTGTTGTGGAATGTCTTTTAACACTTAGAAAAAAAAGTTTGCAGCATGGTTTTGGAGATAATCTTCCTAGTTCCATCACAGTCAGCCCTCGTGTGAATTCACCATTCCATCATCATCATTGTTCTACAACATTTGGTGGAGAGCAAAAGAAGTTTTCAATTTCGTCAAAGTTGCAGCGTGTTATGAGTTCCCCATCTGTGCAGGAGCAATCAGCCTCATTAATACACCATGCTGGTCATAATTTCCATGAGGTGTTTCAACTGAAACCAGGAAGTTACATAGATCTTCCACCTGAAAAAATATCAGAAATGATGAAATCAAACAATATAGATAATGCTCCCACTCAGTCGCTTCTGAGTGTTGTGAATGGTATTCTTGAAGAAAGTGTTGAAAGAAGAAATGGGGAAATACCTCATCAAAACAATCTTTTCAAGGCTCGAGAAGAAAAATACCAGTCCAGAATAAGAGTACTCGAGACACTTGCATCCGAAACTAAAGATGAGAATGAGAGGATCAAAGACGAAGAAAATAAGGTTGATGAGACAGAAGTTGGTAGGTTGATAAAAGAACAGCAGGACAAAATATTGGAAATTTCAGCTTTGAAGATAGAACTGGAAACGGCCAAAAGAACATCTATAGTGCAATTCGCACGGTTGGAAGCAGAAGCTGAGGGTGCTAAAGCAGAACTGACACATATGGTTCAAGAATATAAACAACAAATAGAAGAAGTAAGAAATAAGGCTGAAAATATGAAAGATGAATTAGTTAGGTTGATGAAAGAACAGGAGGACAAAAGAATGGAAATTTCAGCTTTGAAGAGCGAACTGGGAACAGCCAAAAGAACATATGAAGCACAATTCTCTCAACTTGAAGAAGAAGCAAAAGGTGCTAAGGCATGGACAGAAAAGGCCCAAGAATATGAATACCAATTGAAAGTATTACAAAATAAGGTTGAAAAGTTTCAAGAAGAGGTTAAGACAGCAAATGATGAGGAAATTGCTAGGTCGATGAAAGAACGGGAGCACAAAGATTCAGAAATTTTAGCTTTGAAGCAAGCGCTAGAAACAACTAAAACAGCATTTGAAGTACAGCGGTCCCAGTTGGAAAAGGATGTCAAATCAGAATTGGAACAAAAGTGTGAAGAATATGAGCATCAATTAAAAGAGTTAAGAAATAAGGTTAAGGAACTTGAGGTTTCTTCGGATTCAAAAGATCAGAAGTGGAACATGAAAATGAACCGATTTCTGACTGTCATAACATTTCAATTCAGTTCACTACAGAAAATGAAGTTATCTTTGGAATCCACTAAGCAAAATGTAATAAAAGAGCAAACGGTTTATGCAGGGGAGTTGGATCTATTGGGTGTAAAACTTAAACCACTTCTACAGGCAGCTGAAAACTACCACGTTGTTATGGCTGAAAATAAAAAACTGTTCAATGAGATTCAAGAACTGAAAGGAAATATCAGAGTATATTGTCGAATTCGACCATCTGCATTAGGAAAATTGGAAAAAGAGTCTATTGTTGAACACGTTGGTGAAAATGATTTGGTTGTGGCAAATCCATCCAAAGAAGGAAAAGATACTCTTCGATCATTTAAATTTAACAGGGTTTTCAACCCTGCCGCAACTCAAGCGGAGGTATACTCCGACATCCAAGACTTCACTAGATCAGTTCTAGATGGGTATAATGTGTGTATATTTGCTTATGGTCAAACTGGTTCAGGGAAAACTTATACAATGACTGGTCCAAATGGGGCAACAAGCGAGACTATCGGTGTTAACTATCGAGCTCTAAATGACCTCTTCAGGATTTCCACAAGTAGACAAAATATAGTGGAGTATGAGATCGGAGTTCAAATGGTTGAGATATATAACGAGCAAGTCCTCCCAGATGCTAGCTTGTTCCCAGTGAAATTACCTTCAGATGTTATTAAGCTAATGGAAATTGGACTTAAAAATAGAGCCATTGCTGCAACTGCTATGAATGAACGAAGTAGTCGTTCTCACAGTGTTGTCTCAGTTCACGTTACCGGGAAGGACTTAAAGACTGGTTGCACTATGGCTGGTAATCTTCATTTGGTAGATTTGGCTGGAAGTGAAAGAGTAGATCGTTCTGAAGTAATTGGGGATAGGCTCAAAGAAGCACAGCATATAAACAGATCACTAGCTGCCCTTGGAGATGTTATTTTTTCCCTTTCTCAAAAGAGCTCTCATGTACCATACAGAAACAGCAAGCTTACTCAACTTCTACAAACTTCTCTTGGTGGTCAAGCAAAGACGCTCATGTTCGTCCAAATCAATTCAGACGTAAGTTCATATTCTGAAACTCTGAGCACTTTAAAGTTTGCTGAGAGGGTTTCTGGAGTTGAATTAGGAGCTGCACGAAGTAACAAAGAGGGCAAAGACTTTAGAGAAATGATCGAACAGGTGTCTTCTTTGAAGAGCTCTATTTTGGCAAAAGATGAGGAGATTGAGAGGCTTCAAGCCATGAAAGGTTTAGCTGGTAGCAGAGTTAAGCGAAATATAATTCCACGAAGTAGAAGTAGTATCCAGTTACAATCTGCTAGCCCCCAACCAATTGATGATCATGCACAACAAAATGATTTTGTTGCAACTGCAGAAACTTCAGGATGTACAGATTCTGATTTTGACGGAAGATCAAGTGATTTTTCTGACGGTGGTGTTGCTGCAGGCACAGAAACTGATGGTTCTGAAAATTCCAGTCTCACTGAAGTCCCAAAACCACCATCAGAGAAGATGTCTAAAGGACTTCGCAGAACTGTTCAAGCAATGAGGAAATTTGGCCGAACTTCATCAAACACAATCCCTACAATCCCCACCGCCGCCCCAGTAAAGGAACCAGTGAAGAAGTCATCAAGTATTAAAAAAAGCATGAGTATAGGCACTCTTAAGCCTCCAAAACTGTGGAAGTAA 3312 0.3907 MNFPSEATELGCPIDSSFENGSFQSHNVELEAKNRLLLVQWLSSLIPSLKFPPNVTDGELRACLSNGTVLCQILNKLRPGIVNVVSEPDNVLPSQSENVKSFLKVLDLTGLLRFEISDLEKGSMKAVVECLLTLRKKSLQHGFGDNLPSSITVSPRVNSPFHHHHCSTTFGGEQKKFSISSKLQRVMSSPSVQEQSASLIHHAGHNFHEVFQLKPGSYIDLPPEKISEMMKSNNIDNAPTQSLLSVVNGILEESVERRNGEIPHQNNLFKAREEKYQSRIRVLETLASETKDENERIKDEENKVDETEVGRLIKEQQDKILEISALKIELETAKRTSIVQFARLEAEAEGAKAELTHMVQEYKQQIEEVRNKAENMKDELVRLMKEQEDKRMEISALKSELGTAKRTYEAQFSQLEEEAKGAKAWTEKAQEYEYQLKVLQNKVEKFQEEVKTANDEEIARSMKEREHKDSEILALKQALETTKTAFEVQRSQLEKDVKSELEQKCEEYEHQLKELRNKVKELEVSSDSKDQKWNMKMNRFLTVITFQFSSLQKMKLSLESTKQNVIKEQTVYAGELDLLGVKLKPLLQAAENYHVVMAENKKLFNEIQELKGNIRVYCRIRPSALGKLEKESIVEHVGENDLVVANPSKEGKDTLRSFKFNRVFNPAATQAEVYSDIQDFTRSVLDGYNVCIFAYGQTGSGKTYTMTGPNGATSETIGVNYRALNDLFRISTSRQNIVEYEIGVQMVEIYNEQVLPDASLFPVKLPSDVIKLMEIGLKNRAIAATAMNERSSRSHSVVSVHVTGKDLKTGCTMAGNLHLVDLAGSERVDRSEVIGDRLKEAQHINRSLAALGDVIFSLSQKSSHVPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSYSETLSTLKFAERVSGVELGAARSNKEGKDFREMIEQVSSLKSSILAKDEEIERLQAMKGLAGSRVKRNIIPRSRSSIQLQSASPQPIDDHAQQNDFVATAETSGCTDSDFDGRSSDFSDGGVAAGTETDGSENSSLTEVPKPPSEKMSKGLRRTVQAMRKFGRTSSNTIPTIPTAAPVKEPVKKSSSIKKSMSIGTLKPPKLWK 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04083 1103 ProSiteProfiles Kinesin motor domain profile. 613 915 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian1g04083 1103 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 555 755 - -
Vian1g04083 1103 MobiDBLite consensus disorder prediction 1026 1040 - -
Vian1g04083 1103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 589 914 IPR027417 -
Vian1g04083 1103 Coils Coil 280 303 - -
Vian1g04083 1103 Pfam Calponin homology (CH) domain 38 136 IPR001715 GO:0005515
Vian1g04083 1103 Coils Coil 476 532 - -
Vian1g04083 1103 Pfam Microtubule binding 599 754 IPR031852 GO:0008017
Vian1g04083 1103 Gene3D - 23 142 IPR036872 -
Vian1g04083 1103 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 29 141 - -
Vian1g04083 1103 PANTHER KINESIN-LIKE PROTEIN KLP-3 40 391 IPR027640 GO:0003777|GO:0007018
Vian1g04083 1103 SMART kinesin_4 611 923 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian1g04083 1103 MobiDBLite consensus disorder prediction 1058 1072 - -
Vian1g04083 1103 FunFam Kinesin-related protein3 756 957 - -
Vian1g04083 1103 Coils Coil 422 456 - -
Vian1g04083 1103 MobiDBLite consensus disorder prediction 1001 1103 - -
Vian1g04083 1103 SUPERFAMILY Calponin-homology domain, CH-domain 36 142 IPR036872 -
Vian1g04083 1103 ProSiteProfiles Calponin homology (CH) domain profile. 32 139 IPR001715 GO:0005515
Vian1g04083 1103 Gene3D Kinesin motor domain 560 755 IPR036961 -
Vian1g04083 1103 Pfam Kinesin motor domain 759 913 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian1g04083 1103 SMART ch_5 34 137 IPR001715 GO:0005515
Vian1g04083 1103 Gene3D Kinesin motor domain 756 956 IPR036961 -
Vian1g04083 1103 Gene3D - 304 345 - -
Vian1g04083 1103 Gene3D - 373 416 - -
Vian1g04083 1103 Gene3D - 453 493 - -
Vian1g04083 1103 PRINTS Kinesin heavy chain signature 865 886 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian1g04083 1103 PRINTS Kinesin heavy chain signature 687 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian1g04083 1103 PRINTS Kinesin heavy chain signature 816 834 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian1g04083 1103 PRINTS Kinesin heavy chain signature 785 802 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vian1g04083 1103 Coils Coil 341 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04083 Vian-Chr1 63905457 63912050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04083 363 915 Calmodulin-binding Proteins AT5G65930 32.215 3.94e-63 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04083 K10406 - aprc:113855795 1282.32