Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04076 ATGTATGCTTCAATCCCTCTTCTCCTCCTTTTGACCTTCTTAATTTCATCCATTCTCTCATTCATCTTCCTGCGTCGAAACCACACCCAAGATCACCGGAGACACCCGCCGGGCCCACCACCATTCCCAATCATCGGTAACCTCCACTTGCTGGGGAAGCTCCCGCACCGCACGCTCCAGGCCCTGGCCCAACAATACGGGCCCATCATGTCCCTTCGCCTGGGTCAGGTCCCAACCGTGGTCGTCTCCTCCTCCGAGTCCGTCCAACACTTCCTCAAATCACACGACGTCGTTTTCGCTAGCCGTCCAATACTCGAAGCGTCCAAGTACTTCGGCTACGGCTCCAAGGGACTAGTGTTCTCGGAGTACGGCCCGTACTGGCGGCACATGAGGAAAGTGTGCACGCTCCAACTTCTGAGCGCGTCGAAGGTGGAGTCCTTCGCGCCGTTGAGGAAGCGGGAGCTGGAGCTGGCAGTGAAGTCGGTGCAGGAGCGCGCCGCAAGAGGGGAGGTGTTGGACCTTAGCATGGTGGTGCACGACGTTGTGGAGGATATCGTGTACAAAATGGTGCTGGGATGTAGCAAGCACGATGAGTTTGATTTGAAGGGGTTGATTCAGAACGGGATGAACATCACTGGTGCGTTTAATCTAGCGGATTATGTGCCCTGGCTTGGTTCTTTGGATCTTCAGGGATTGAATCGAAGTTACAAGAAAATTAGTACAGCACTTGACCAAGTGTTGGAAAAGATAATAAAGGAGCATGAAGACGGTTCAAATGCACAAAATGAGCAGCAACATAAGGACTTCGTAGACATATTACTCTCGCTGATGTACCAACCCATGGATCCTTATGGTGAACAAAGCCATGTCATTGATCGAACTAACATCAAGGCTATACTTTTAGATATGATTTCTGGGGCATTTGAAACTTCTGCAACTGTGGTGGAGTGGACGCTATCCGAACTCCTAAGGCATCCGAGAGTGATGAAAAAGCTTCAAGATGAGCTAGATAATGTGGTTGGAAGGAACAAATTAGTGGAGGAAAATCATTTGGTGAAGTTAAATTACTTGGATATTGTGATCAAGGAGATATTGAGATTATATCCTCCTGGACCATTAGTTCCCCGAGAGTCAACAGAGGATGCTGTAGTTCAGGGTTATTTCTTAAAGAAAAAATCAAGAATCATAATAAACTTATGGGCCATGGGAAGAGATTCTAAGATATGGTCTAATAATGCTGAAGTATTTTATCCAGAGAGATTCATCGATAACAATTTAGACTTCAGAGGATATGACTTTAAGTATATGCCATTTGGTTTTGGTCGAAGGGGCTGCCCAGGAATAAACCTGGGCTTAGCAACAGTTAAACTTGTTGTGGCTCAATTAGTACATTGTTTTAGTTGGGAACTTCCAGGAGGTATGACCCCAGATGAGTTGGATATGAATGAGAAATTTGGCCTCTCAATACCAAGACTCAAGCACTTGTTTGCTGTACCCAGGAATCGTTTTCACAGAGAATCTTGCAAAGAATAA 1533 0.4658 MYASIPLLLLLTFLISSILSFIFLRRNHTQDHRRHPPGPPPFPIIGNLHLLGKLPHRTLQALAQQYGPIMSLRLGQVPTVVVSSSESVQHFLKSHDVVFASRPILEASKYFGYGSKGLVFSEYGPYWRHMRKVCTLQLLSASKVESFAPLRKRELELAVKSVQERAARGEVLDLSMVVHDVVEDIVYKMVLGCSKHDEFDLKGLIQNGMNITGAFNLADYVPWLGSLDLQGLNRSYKKISTALDQVLEKIIKEHEDGSNAQNEQQHKDFVDILLSLMYQPMDPYGEQSHVIDRTNIKAILLDMISGAFETSATVVEWTLSELLRHPRVMKKLQDELDNVVGRNKLVEENHLVKLNYLDIVIKEILRLYPPGPLVPRESTEDAVVQGYFLKKKSRIIINLWAMGRDSKIWSNNAEVFYPERFIDNNLDFRGYDFKYMPFGFGRRGCPGINLGLATVKLVVAQLVHCFSWELPGGMTPDELDMNEKFGLSIPRLKHLFAVPRNRFHRESCKE 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04076 510 FunFam Cytochrome P450 83B1 22 498 - -
Vian1g04076 510 Gene3D Cytochrome P450 21 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g04076 510 SUPERFAMILY Cytochrome P450 30 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g04076 510 CDD CYP71-like 65 495 - -
Vian1g04076 510 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g04076 510 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g04076 510 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g04076 510 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g04076 510 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g04076 510 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g04076 510 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g04076 510 PANTHER CYTOCHROME P450 93A3-LIKE 11 503 - -
Vian1g04076 510 Pfam Cytochrome P450 36 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g04076 510 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g04076 510 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g04076 510 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian1g04076 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Vian1g04076 510 Coils Coil 329 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04076 Vian-Chr1 63848784 63850469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04076 9 503 Cytochrome P450 AT5G07990 39.804 1.14e-122 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04076 - - gmx:100814172 771.926