Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04058 ATGTCAGGTCTTAGCAATGGCGACGCTGCCTCCGTCAAGAAGCTCCCGTCGGTCAAGTTCACCAAGCTGTTCATCAACGGAGAGTTTGCCGACTCTGTCTCAGGAAAGACATTCGAGAGCATAGATCCAAGAACTGGAGAGGTTATAGCAAGGATCAGCGAAGGAGATAAGGAAGACATAGACATTGCTGTTAAAGCAGCACGTCACGCCTTTGACTTTGGTCCTTGGCCTCGCATGTCTGGCGCTGACAGAGCTAAAATACTAATGAAATGGGCGGAACTAATTGATGAACACGCAGAAGAACTTGCAACATTGGATGCCATTGATGCAGGGAAGCTGTTTCACATGTGTAAGAATTTGGAAGTTCCAGCAGCCGCAAACACTGTACGCTACTACGCAGGTGCTGCCGACAAGATTCATGGAGAGGTCTTGAAAATGTCTAGAGAGTTCCATGCGTACACATTACTGGAACCAATTGGTGTTGTGGGACACATAACTCCTTGGAATTTTCCCAATACCATGTTTTATATTAAGGTTGCTCCTTCTTTAGCTGCTGGTTGCACCATGGTCATCAAGCCTGCTGAGCAAACACCCCTCTCTGCTTTGTATAACGCTCATCTTTCTAAGTTGGCTGGAATTCCAGATGGAGTGATCAATGTTGTGACAGGATTTGGCCCAACTGCTGGTGCTGCATTAAGTTCACACATGGATGTTGATAAGGTCAGCTTTACCGGTTCAACCCAAACGGGTCGTGAGATAATGCAGGCTGCAGCTAAGAGTAACTTGAAACAAGTTTCACTTGAATTAGGAGGCAAGTCACCCCTCATAATTTTCGATGATGCTGATGTAGAAAAAGCTGCTGAGCTTGCTTTGATCGGTATCCTATATAACAAGGGAGAAGTTTGTGTAGCAAGTTCTCGTGTATTTGTGCAAGAAGGGATCTATGATGAATTTGAGAAAAAATTGTTGGAGAAGGCAAAAGCTTGGGTGGTTGGAGATCCTTTTGATCCTAAAGTCCAACAAGGACCACAGGTTGACAAGGAACAGTTCGAGAAGATTCTTTCATACATTGAGCATGGAAAGAGAGAAGGAGCAACGCTTTTAACCGGTGGTAAAACATTGGGCAGTAAGGGCTACTTCATTGAGCCAACAATTTTCTCTGATATAAAGGACGATATGCTCATAGCACAAGATGAAATATTTGGCCCTGTGATGGCGTTGAAGAAGTTTAAGAGCATTGAAGAAGCAATTAAGAGTGCGAATAATAGTAAGTATGGGTTAGCAGCAGGCATAGTGACAAAGAATTTGGATACAGCAAATACTGTGTCAAGGTCGATTCGTGCAGGTACCGTTTGGATCAATTGCTACTTTGCCTTTGGTGATGATGTTCCCTTTGGAGGGTACAAGATGAGTGGATTTGGAAAAGATCATGGCTTGGAAGCCCTTCACAAATACTTGCAAGTTAAATCTGTTGTAACACCTCTTTACAATTCTCCTTGGCTTTGA 1506 0.4382 MSGLSNGDAASVKKLPSVKFTKLFINGEFADSVSGKTFESIDPRTGEVIARISEGDKEDIDIAVKAARHAFDFGPWPRMSGADRAKILMKWAELIDEHAEELATLDAIDAGKLFHMCKNLEVPAAANTVRYYAGAADKIHGEVLKMSREFHAYTLLEPIGVVGHITPWNFPNTMFYIKVAPSLAAGCTMVIKPAEQTPLSALYNAHLSKLAGIPDGVINVVTGFGPTAGAALSSHMDVDKVSFTGSTQTGREIMQAAAKSNLKQVSLELGGKSPLIIFDDADVEKAAELALIGILYNKGEVCVASSRVFVQEGIYDEFEKKLLEKAKAWVVGDPFDPKVQQGPQVDKEQFEKILSYIEHGKREGATLLTGGKTLGSKGYFIEPTIFSDIKDDMLIAQDEIFGPVMALKKFKSIEEAIKSANNSKYGLAAGIVTKNLDTANTVSRSIRAGTVWINCYFAFGDDVPFGGYKMSGFGKDHGLEALHKYLQVKSVVTPLYNSPWL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04058 501 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 25 288 - -
Vian1g04058 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 13 491 - -
Vian1g04058 501 SUPERFAMILY ALDH-like 15 497 IPR016161 GO:0016491
Vian1g04058 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Vian1g04058 501 FunFam Aldehyde dehydrogenase3 271 460 - -
Vian1g04058 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Vian1g04058 501 Pfam Aldehyde dehydrogenase family 32 491 IPR015590 GO:0016491
Vian1g04058 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Vian1g04058 501 FunFam Aldehyde dehydrogenase, putative 463 489 - -
Vian1g04058 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04058 Vian-Chr1 63622405 63626801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04058 2 501 Aldehyde Dehydrogenase Gene Family AT3G24503 70.459 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04058 K12355 - gmx:100811540 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04058 1 63622405 63626801 Vian8g01529 8 34822392 34825250 PCT