Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04049 ATGGAAAACCAAACCGGTCTCAAGCTCAGAATCTCTCGCATGTTCAGATCCTCCTTCGGTTCCTGTCGAACAAGACACATAGCCGATGTGATGGAAAAAGCAGTTTTTGCACCACCCACTTCCATTGACCCACCCTCTCCCAAAACCACACCCTTTGCTCCCACTTGTAGGTCCAAAACAATCAATGACACTTGCATACTCTCCTTTGACGATTCTCATTCTCTCTCTAGACGCAAAATCTCACATTTTTCATCACCTTTTCTCTGGGCCAACACCACCACTGCCACCACCAACAACCTCAAGCTTAACCTCGGTGTCATGTCGTGTCCCCCCACTTCTCCCAAAGTTTCCCTAAACACAATCCAAGACCACGAATTCATTTTCCACGACAAGAAGAAGACTTCTTCTTCAACAAAAAACGTTAAGACCAAGAAAAAGAAGAAGAAGAAGAGACGTTCCCAGAAGAGAAGGGACTTTTTCCCTTTCAATTCATGCTCCAAAGACACCAACTTTGGTGGCTACTGGTGGTACAGCAGCAACGAAGACGATGAAACTGACACCCTTTTCTCCTCCAAGAGCCTCTCCTCCGACTCCTCCAGGTCCCGGCGCCGTGGCCGGAAAAGTGACCGGAGCTCCGACATGGGTGTTCTGCCGCTGCACGGGAAGGTGAAGGACACGTTCGCGGTGGTGAAGCGCTCGAGCGATCCTTACAGTGATTTCAGGACCTCGATGCTGGAGATGATCGTGGAGAAGCAGATATTTTCGCCAGCGGATTTGGAGAATCTCTTGCAGTGTTTTCTGTCTCTGAATTCGTATCATCATCATAAGATCATTGTCCAAGTCTTCACGGAGATTTGGGAGGCTTTGTTCTCTGACTGGTTTTGA 885 0.4836 MENQTGLKLRISRMFRSSFGSCRTRHIADVMEKAVFAPPTSIDPPSPKTTPFAPTCRSKTINDTCILSFDDSHSLSRRKISHFSSPFLWANTTTATTNNLKLNLGVMSCPPTSPKVSLNTIQDHEFIFHDKKKTSSSTKNVKTKKKKKKKRRSQKRRDFFPFNSCSKDTNFGGYWWYSSNEDDETDTLFSSKSLSSDSSRSRRRGRKSDRSSDMGVLPLHGKVKDTFAVVKRSSDPYSDFRTSMLEMIVEKQIFSPADLENLLQCFLSLNSYHHHKIIVQVFTEIWEALFSDWF 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04049 294 MobiDBLite consensus disorder prediction 189 216 - -
Vian1g04049 294 NCBIfam uncharacterized plant-specific domain TIGR01568 227 290 IPR006458 -
Vian1g04049 294 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 128 291 IPR038933 GO:0045892
Vian1g04049 294 ProSiteProfiles OVATE domain profile. 229 288 IPR006458 -
Vian1g04049 294 MobiDBLite consensus disorder prediction 138 155 - -
Vian1g04049 294 MobiDBLite consensus disorder prediction 132 155 - -
Vian1g04049 294 MobiDBLite consensus disorder prediction 197 213 - -
Vian1g04049 294 Pfam Transcriptional repressor, ovate 233 290 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04049 Vian-Chr1 63525667 63526551 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vian1g04049 Ovate 3.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04049 - - gmx:100776613 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04049 1 63525667 63526551 Vian1g04049 1 63525667 63526551 ECH