Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04044 ATGTATAGATCATTTCTGAAATGTGATGATCCAAAAGGAGTTGTAGGATGTGGGACAATCAGGAAATACAGAACTCGTTCTCACAAAGGGAAGGACAAGACAAAAATGCAGAAGACAAGTGATATAATGGAAACATCCTTGATCAACAAGAGATACAAGGAGGAGAAGAAGGTCGCCAAAGAATGCGATGGAAATCTCGTTGGTCCATCATCTTTGCAGCTCACAAAGGTCTCCGAAGAGGATCATAGCTTGACCAATATGCTAGATTCATGGTCTAGAGATATTATATGTGAAGGAAAGTCCGAAGATATAGCAAAAGGTATTTTAAAAGGGGCTCTTGGTCTGCAAGATTCTCTAAGCATGCTTCGCAAGTTGCAAGAAGAGGCCGCACAACATACAGCTCCTTTTGGGAGAAAACAGACTGAGAAATCAGAAAGAGACAGAATTGATGGAAACAAGATTGGTATAAGGCAGGCTAATCCATTAGGAGAACAAAGTAATACAAAGGGGTTTCAAAGATCACAGCTTTCTGCTGGTGGTTCTTCAAGTAACTGCAAAGAGGAACTAAAGAAGGTGATTAAGGAGAGTTTGGTTAGGCAAAATATGTTTCCAAAGACCTCTGACGGATTTAATTCAGGTTCAGAAACTTTTCATATAAGCACAAGCCAATGTTTTGGGGTCAAGAATGACAGCCTTTCTGATCCTTCTTTATCAGTAATAGCTTCAAGGATTGAAAAAGGACCTAGCCTAGTTTTCAAGCTGATGGGTTTAGAAGAAGGCCCCTCAAAATCATTTCCAGCTGCTAAGCAAAAACTAGTGGGTGGTGAGATAGATAAGTCAAAGATCAGAAACAATGATTCTTCTACGGCTGAGAAGGTTAATCCAGAACTAAAAGTCGTGAGGGAAACTCTTGAGACTACGCATTTCAAAGGTATTTTTAAGGAGAATTTTGTCAAAGATTCTAAGCTTCATGTGCATCATCATTTCAATGACACCAGTTCCAAGCAGTTTGTTGATTTATCTCACATTTCATCTACGGAACCTCAATGTACAATTTACCAACAATCAGAAAAAAGTGCCTATATTCCAGTTCTTCCAAAGGAGTTGACAAAACTGAGAAGAGAAATACTCTCTTCCAAAACTATCAAACATAGAAAAGGTTCCAGTTCCACCAACATGGGAAAAGAAATGGAAAAAGGTATTAGGAAACGGCTTAAGAAAGAGGGAGGACCAAAATTTCTCAAAGAGGTTACTAAAGTGGATGCAAAAGGAAACAGTCCTGTTGAAGAATATGCGGGTAAGGTAAAACTGTATTGTCACATTGGTCACACATCACATGTAAATGAGACAATTGATAGAAAATGGAAGGTACGGCCCATTAGCAGAAAACAGACAGAAAAGGATATCTCACAACCAACAATTGTGGCAGAACATCAGTACAAACGAGAAATCCCCTCCACAAAATTGAGGAAGCTGAAAAGTGGATCCAGAATCGACAAGAATGAGATTTCTTGCCTAAAGAGTAGAGGTTCAAACAACATCTCCACTAAAAAAACTACGAATTCCAAGGACGTTAAAGTTGAGAATAAAAAAGTTAATTCCGTGGTAGATTCCTTAACAGGTAGAAAGAATCAAATGAAAAAACAAAGCCCTGTTGCTGAGCCAGAACTGGCTAATCTAACTGTTGCACAAACCAGGCAGATAGAAAAGAAGAAAAATTACCCCGAGATTAGAATCTCAACTAGACTAGAAGATGAGCTCCTGATGGTGTGTGAAGCAGATGCCTTCATAAATAAGATTGGAGAAAAATGCAAGATGAGGAAGAGTTCTTCAGGCGATGAGGTCATTACGCTGCTCAAATCTGAACATAGAAATGATGATATCAATGCTTATAGCATCGACGGTGACAGAGAAGGGACAGAGCTGAAACATTTTCTTCTAACGAGTCCATCATTCATAGGACATGCAAAGAAGCTCTTCAATCTTGATGTGGATCGTCACAACACCCTAGAAAAGGATGAAACCATTTACAGCATTACAAACATGAGGCTTTACTTGGATTGCGCTTACGAACTGACAGAACGTAAGAGTCTTCAAGACTCCGAAGTCGTTCGTTCTCTCTTGCTGGCATGTGGGGGAAACTCAAGATTACGCATCTCCTTATGCAAGTTGGTGGAAGAAATCTGTGATGGCATTGAGAATCTGAAATTTTACAGAGAAGATTATGATTGTAGAGAGGAAGATTTTGCATACAATGACACCTTTGCAATGATGGAGAAAGACATGAAGTGCAAGCGAGAGATAAATGGAATGTGGGAAACTGGTTGGAGAACAGGCTTTTGTGCAGACGAGGCTCAACTGGTTGTCAATAAAATAGAGAGCCTGCTTATAAGTGGATTAATTGAGGACCTTGTGATCAATTTATTAGCTTAA 2433 0.3933 MYRSFLKCDDPKGVVGCGTIRKYRTRSHKGKDKTKMQKTSDIMETSLINKRYKEEKKVAKECDGNLVGPSSLQLTKVSEEDHSLTNMLDSWSRDIICEGKSEDIAKGILKGALGLQDSLSMLRKLQEEAAQHTAPFGRKQTEKSERDRIDGNKIGIRQANPLGEQSNTKGFQRSQLSAGGSSSNCKEELKKVIKESLVRQNMFPKTSDGFNSGSETFHISTSQCFGVKNDSLSDPSLSVIASRIEKGPSLVFKLMGLEEGPSKSFPAAKQKLVGGEIDKSKIRNNDSSTAEKVNPELKVVRETLETTHFKGIFKENFVKDSKLHVHHHFNDTSSKQFVDLSHISSTEPQCTIYQQSEKSAYIPVLPKELTKLRREILSSKTIKHRKGSSSTNMGKEMEKGIRKRLKKEGGPKFLKEVTKVDAKGNSPVEEYAGKVKLYCHIGHTSHVNETIDRKWKVRPISRKQTEKDISQPTIVAEHQYKREIPSTKLRKLKSGSRIDKNEISCLKSRGSNNISTKKTTNSKDVKVENKKVNSVVDSLTGRKNQMKKQSPVAEPELANLTVAQTRQIEKKKNYPEIRISTRLEDELLMVCEADAFINKIGEKCKMRKSSSGDEVITLLKSEHRNDDINAYSIDGDREGTELKHFLLTSPSFIGHAKKLFNLDVDRHNTLEKDETIYSITNMRLYLDCAYELTERKSLQDSEVVRSLLLACGGNSRLRISLCKLVEEICDGIENLKFYREDYDCREEDFAYNDTFAMMEKDMKCKREINGMWETGWRTGFCADEAQLVVNKIESLLISGLIEDLVINLLA 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04044 810 PANTHER OS01G0228800 PROTEIN-RELATED 1 808 - -
Vian1g04044 810 MobiDBLite consensus disorder prediction 129 183 - -
Vian1g04044 810 MobiDBLite consensus disorder prediction 159 183 - -
Vian1g04044 810 MobiDBLite consensus disorder prediction 138 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04044 Vian-Chr1 63479678 63482806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04044 642 805 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 32.941 1.55e-20 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04044 - - var:108346558 1597.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04044 1 63479678 63482806 Vian1g04044 1 63479678 63482806 ECH
Vian1g04044 1 63479678 63482806 Vian8g01556 8 35109564 35112568 PCT