Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04025 ATGGTGAGAGTGGTTCCCATGGCTTCTTCGGTTCGACCCACTCTCTTCTCCCTTACCTTCTCTCCACCTTCCTCACTTCCTCTCTTCAATCCTTCTCCCCGTCTCTCCTTCTCTCTGTCTCGGTACCATAATTTTGGTCTGAAAGCTTCCAGATTGTTCAGACAAGATGGTTATCCCGTGAGAGTCATGGCATCAGGGGACGTGTCACAATCTGTAGCGGCTGCTTCACCAGAAAATGTGCTTGAGTGGGTCAAGCAGGACAAGAGAAGAATGCTTCACGTTGTGTATCGAGTTGGGGACTTGGACAGGACTATAAAGTTTTATACTGAGTGTCTGGGAATGAAGCTCCTCAGAAAGAGGGACATACCGGAGGAGAGATATACTAATGCCTTTCTTGGATATGGGCCTGAAGACTCACACTTTGTTATTGAACTGACATATAATTATGGAGTTGACAAGTATGATATTGGAACTGGATTTGGCCATTTTGGTATTGCCGTTGATGATGTTGTAAAAGCAGTGGAGCTAATAAGAGCTAAGGGTGGTAAAATAACAAGAGAGCCTGGGCCTGTAAAGGGAGGCCGTTCAGTAATTGCATTTGTTGAAGACCCTGATGGTTATAAATTTGAACTTATAGAAAGAGGTCCAACTCCTGAACCCTTGTGCCAAGTAATGCTCCGAGTGGGTGATCTTAATCGTTCCATAGAATTTTATGAGAAGGTCAGGGCATTTGGTATGGAGTTGCTTCGTACTCGAGACAATCCAGAATACAAGTATACCATAGCAATGCTGGGTTATGGTCCAGAAGATAAAAGCACTGTTCTGGAGTTGACTTACAATTATGGAGTCACTGAATACGATAAAGGAAATGCTTATGCTCAGATTGCAGTAGGCACCGATGATGTGTACAAAACTGCAGAAGCAATTAAACTAGCTGGAGGGAAGGTTACTCGTGAACCTGGACCATTACCTGGTATCAACACCAAAATTACTGCATGCTTGGATCCTGATGGTTGGAAGTCGGTTTTTGTAGATAATGTTGATTTTCTAAAGGAGTTGGAATAG 1065 0.4357 MVRVVPMASSVRPTLFSLTFSPPSSLPLFNPSPRLSFSLSRYHNFGLKASRLFRQDGYPVRVMASGDVSQSVAAASPENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVVKAVELIRAKGGKITREPGPVKGGRSVIAFVEDPDGYKFELIERGPTPEPLCQVMLRVGDLNRSIEFYEKVRAFGMELLRTRDNPEYKYTIAMLGYGPEDKSTVLELTYNYGVTEYDKGNAYAQIAVGTDDVYKTAEAIKLAGGKVTREPGPLPGINTKITACLDPDGWKSVFVDNVDFLKELE 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04025 354 CDD GlxI_Ni 91 212 - -
Vian1g04025 354 ProSitePatterns Glyoxalase I signature 1. 93 114 IPR018146 GO:0004462|GO:0046872
Vian1g04025 354 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 221 344 IPR029068 -
Vian1g04025 354 ProSitePatterns Glyoxalase I signature 2. 157 169 IPR018146 GO:0004462|GO:0046872
Vian1g04025 354 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 220 346 IPR037523 -
Vian1g04025 354 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 90 214 IPR037523 -
Vian1g04025 354 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 223 340 IPR004360 -
Vian1g04025 354 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 91 211 IPR004360 -
Vian1g04025 354 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 89 219 IPR029068 -
Vian1g04025 354 PANTHER LACTOYLGLUTATHIONE LYASE 70 354 - -
Vian1g04025 354 Gene3D - 62 215 IPR029068 -
Vian1g04025 354 Gene3D - 217 354 IPR029068 -
Vian1g04025 354 Coils Coil 350 354 - -
Vian1g04025 354 FunFam Lactoylglutathione lyase 87 216 - -
Vian1g04025 354 FunFam Lactoylglutathione lyase 217 354 - -
Vian1g04025 354 NCBIfam lactoylglutathione lyase 90 215 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04025 Vian-Chr1 63324747 63329338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04025 223 343 Calmodulin-binding Proteins AT1G08110 29.252 1.30e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g04025 K01759 - gmx:100780463 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04025 1 63324747 63329338 Vian1g04025 1 63324747 63329338 ECH
Vian1g04025 1 63324747 63329338 Vian8g01585 8 35356603 35360119 PCT