Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03992 ATGAAGATCGAGGAATTGGACGACGCGGAGTGTAGTATAGACGAACAAGAGAAGTACGAGAAGCAGATGGTCAGCGTTGAAGTGAAGAGAGCGTTGGTGGGCGCAGGTGCTCGGATCCTGTTCTATCCCACTCTCTTGTATAATGTGCTTCGTAACAAAATTGAAGCTGAGTTCAGGTGGTGGGATCAAATTGACGAGTTTTTGTTACTGGGCGCTGTTCCTTTCCCCAAGGACGTCCCTCTTTTGAAGAGCCTTGGTGTGGGTGGTGTGATTACTCTCAATGAGCCATATGAAACCTTGGTGCCGTCGTCGTTGTATCGGGCTCACGGGATTGATCATTTGGTAATTCCCACAAGAGATTATCTCTTTGCCCCCTCGATTGTTGATATCAACCAGGCTGTGCAGTTCATTCATCGTGGGTGTTTTCTTGTTGAATACAAGCACATGACACCTGCTGCTGCCCTGGAATATGTGCGGTCTCGACGACCTAGAGTGCTACTAGCACCATCACAGTGGAAGGCTGTTCAAAACTATAACAATCGCAGGCCGTGTCCTTTACCGTACTCCCCCTCTGGGGACGCAGTTCTTATAACCAAAGCGGATCTTGAAGGATATCATAGCACATGTGATGCTGGTATGGAGCTGGCTATTGTCCCCAAACTTCCAAGGACTATGCCCATGATTGCAAGATTATCTTGCCTGTTTGCATCATTGAAAGTATCTGGTAGCAGTGTACCAATGATCAGGCGGCTGCCGGTTTCTGAGTCACGTGCTTGCTAA 780 0.4821 MKIEELDDAECSIDEQEKYEKQMVSVEVKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDQIDEFLLLGAVPFPKDVPLLKSLGVGGVITLNEPYETLVPSSLYRAHGIDHLVIPTRDYLFAPSIVDINQAVQFIHRGCFLVEYKHMTPAAALEYVRSRRPRVLLAPSQWKAVQNYNNRRPCPLPYSPSGDAVLITKADLEGYHSTCDAGMELAIVPKLPRTMPMIARLSCLFASLKVSGSSVPMIRRLPVSESRAC 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03992 259 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 141 237 - -
Vian1g03992 259 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 54 179 IPR029021 -
Vian1g03992 259 Gene3D Protein tyrosine phosphatase superfamily 60 139 IPR029021 -
Vian1g03992 259 Gene3D Protein tyrosine phosphatase superfamily 140 182 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03992 Vian-Chr1 63014972 63016550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03992 10 247 Protein tyrosine phosphatase (PTP) family AT2G35680 44.660 6.00e-78 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03992 - - gmx:100817410 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03992 1 63014972 63016550 Vian1g03992 1 63014972 63016550 ECH