Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03976 ATGTCCTCTAATCCAATAATACTGCAGAGTGAGAAGTTGACCAAGTATATACTGGAGACTAGTGTTTACCCTCGAGAAGCCAAGACTCTCAAAGAGCTAAGGAATGTCACCGCAACACACCCTTGGGGATTTATGGGCGCTGATCCTGATGCGGGTCAGCTAATGGCCTTGCTCTTGAAGCTGTTGAATGCTAAAAAGACCATTGAAGTGGGAGTTTTTACAGGATACTCTCTTCTCCTCACTGCACTAACCATTCCAGACGATGGAAAGATTATAGCCCTGGATCCAGATAGAGAAGCTTATGAGATAGGACTACCATTCATTAAGAAGGCTGGTGTAGAGCACAAGATCGACTTCATTCAGTCCCCAGCTCTACCTGTTCTTGATAAACTATTAGAAGACGATTCGAATAAGGATAGTTTTGACTTTGCCTTCGTTGATGCTGATAAAGATAACTACTGGAATTACCACGAGCGGCTTCTTAAACTGGTGAAGATTGGTGGGTTAATAATCTATGATAATACCCTCTGGGGTGGAACTGTTGCCTGGCCTGAAGAGGATGTTCCAATACCCAAAAGAAAATACCGGCAGGCTGTTGTAGCTTTCAACAAAGCAATTGCAGATGATTCTCGTGTTGAAATTTCTGTTGTTTCAATTGGTGATGGCTTCACTATTTGCTGGCGTGCTCAATGA 693 0.4315 MSSNPIILQSEKLTKYILETSVYPREAKTLKELRNVTATHPWGFMGADPDAGQLMALLLKLLNAKKTIEVGVFTGYSLLLTALTIPDDGKIIALDPDREAYEIGLPFIKKAGVEHKIDFIQSPALPVLDKLLEDDSNKDSFDFAFVDADKDNYWNYHERLLKLVKIGGLIIYDNTLWGGTVAWPEEDVPIPKRKYRQAVVAFNKAIADDSRVEISVVSIGDGFTICWRAQ 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03976 230 Pfam O-methyltransferase 19 228 IPR002935 GO:0008171
Vian1g03976 230 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 228 IPR029063 -
Vian1g03976 230 PANTHER O-METHYLTRANSFERASE-RELATED 4 228 - -
Vian1g03976 230 Gene3D Vaccinia Virus protein VP39 2 229 IPR029063 -
Vian1g03976 230 CDD AdoMet_MTases 68 172 - -
Vian1g03976 230 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 6 229 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03976 Vian-Chr1 62876151 62877604 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03976 7 228 Monolignol Biosynthesis Gene Families AT4G26220 63.964 5.97e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03976 K00588 - gmx:100792717 410.994