Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03973 ATGTCCGCTAATCCAACAATACTGCAGAGTGAGAAGTTGACCAAGTATATACTGGAGACTAGCGTTTACCCTCGAGAAGCCGAGACTCTCAAAGAGCTAAGGAATGCCACCGCAACACACCCTTGGGGATTTATGGGCGCTGATCCTGATGCGGGTCAGCTAATGGCCTTGCTCTTGAAGCTGTTGAATGCTAAAAAGACAATTGAAGTGGGAGTTTTTACAGGATACTCTCTTCTCCTCACTGCACTAACCATTCCAGATGATGGAAAGATTATAGCCCTGGATCCAGATAGGGAAGCTTATGAGATAGGACTACCATTCATTAAGAAGGCTGGTGTAGAGCACAAGATCGACTTCATTCAGTCTCCAGCTCTACCTGTTCTTGATAAACTATTAGAAGACGATTCAAATAAGGATAGTTTTGAGTTTGCCTTCGTTGATGCTGATAAAGATAACTACTGGAATTACCACGAGCGGCTTCTTAAACTGGTGAAGATTGGTGGGTTAATAATCTATGATAACACCCTCTGGGGTGGAACTGTTGTCTGGCCTGAAGAGGATGTTCCAATACCCAAAAGAAAAAACAGGCAGGCTGTTGTAGCTTTCAACAAAGCAATTGCAGATGATTCTCGTGTTGAAATTTCTGCTGTTTCAATTGGTGATGGCTTCACTATTTGCAGGCGTGCTCAATGA 693 0.4343 MSANPTILQSEKLTKYILETSVYPREAETLKELRNATATHPWGFMGADPDAGQLMALLLKLLNAKKTIEVGVFTGYSLLLTALTIPDDGKIIALDPDREAYEIGLPFIKKAGVEHKIDFIQSPALPVLDKLLEDDSNKDSFEFAFVDADKDNYWNYHERLLKLVKIGGLIIYDNTLWGGTVVWPEEDVPIPKRKNRQAVVAFNKAIADDSRVEISAVSIGDGFTICRRAQ 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03973 230 PANTHER O-METHYLTRANSFERASE-RELATED 4 229 - -
Vian1g03973 230 Pfam O-methyltransferase 19 228 IPR002935 GO:0008171
Vian1g03973 230 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 228 IPR029063 -
Vian1g03973 230 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 6 229 IPR002935 GO:0008171
Vian1g03973 230 Gene3D Vaccinia Virus protein VP39 2 229 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03973 Vian-Chr1 62850707 62852168 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03973 7 228 Monolignol Biosynthesis Gene Families AT4G26220 63.964 8.48e-107 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03973 K00588 - gmx:100780516 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03973 1 62850707 62852168 Vian1g03973 1 62850707 62852168 ECH