Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03965 ATGAGCAGCCAAAAGGGTCGTCATGAAGAAGAGATGGGCACCTCAGAAACCACCGGGAAAGTGGTTGTGGTTGCAGTTAAAGCTTCCAGAGATATCTCAAGGACTGCTCTGGTGTGGGCTTTGACTCATGTTGTTCAACCAGGGGATTGCATTAAGCTGTTGGTGGTCATTCCGGCTCTTTCTTCAAGCAAGAGGGTATGGGGATTTTCAAGATTTACCACTGACTGTGCCTCCAGTAATTGGAGATCCAGTTTAGGAACTGCTTCAGATCAGAAAGAAGTTATAACAAAATCCTGTTCTCAGTTAGTGCTTCAACTCCATGATTTTTACGATCCAGAGAAGATAAAGATCAGAGTGAAGATTCTTTCTGGTTCTTCATGTGGAGGTGTGGCCGCTGAGGCCAAGAGAGTTGAGTCAAGCTGGGTTATATTGGACAAAAAGTTGAAGCATGAAAAGAAATACTGCATGGAGCAGCTGCATTGCAATATTGTAATGATGAAGCGGTCTAGGCCAAAGATTCTGCGCTTGAATTTGAACAGTTCACCTAAGATGGAACTGAACATGGGTTGTCCATTGAAACTCAGAAGAAACTTGAAAGAGAACACTGGACATGGAGGTATAATCAGAGGTCCAGCTGTTACTCCTGCTAGCAGTCCTGAACAAGGGTCACCACCATTGACTGCAACTGATGTTGGAACATCATCAATATCAAGCTCAGATCCTGCTACTTCCCCATTTTTTCACTCTGACAACTATGAGAGACAAAGGAGAGGTTTCACCTTCGTTCACGAGGGACTGACAAACCTAGAGGATATTGAGTCTGACTCCGAGAGCGAAAAGCTTAGCATGTCGTCCAAGAGTTCATATTTTCAGCCATGGATTGCGAATGTGATTTGCATGGATGGTGATTTCTCAAAGCATGAAGACAACGTGCAAAGATCCAGCGACAAGACTTTGGCAACTGCATATGAAGCTTTGCTTCAGAAATTCTCAAAGTTGGATGAAGATCCTATACTGGGAATGCTTAACTGTAAAATTGATGTGAACTTGAGCAAAAGTGTTAGAGAAGCAATTTCACTAGCTAAAGGTTCACCTCCTGGCCCTCCTCCACTGTGCTCCATTTGTCAGCACAAGGCACCGGTGTTTGGAAATCCACCAAGGTGGTTTACATTTGCTGAATTGCAGCTTGCCACGGGTGGTTTTTCACAAGCAAACTTCTTGGCAGAAGGTGGTTTTGGTTCCGTACACCGTGGAGTTCTGCATGACGGACAAGTCATTGCTGTGAAACAGTATAAATTAGCCAGCACTCAAGGAGATAAAGAGTTTTGCTCAGAAGTTGAGGTCTTAAGCTGTGCACAACATCGCAATGTTGTGATGCTAATTGGGTTCTGTGTGGAGAACGGAAGAAGATTGCTGGTTTACGAATACATCTGCAATGGCTCTCTGGATTCTCATCTCTACAGACGAAAGCAGAATGTTCTGGAATGGTCTGCAAGACAAAAGATTGCAGTTGGAGCAGCACGTGGTTTGAGATACCTTCATGAAGAATGTAGAGTGGGTTGTATTGTGCACCGTGACATGAGGCCCAATAATATCCTCCTCACTCATGATTTTGAAGCTTTGGTGGGAGATTTTGGACTTGCTAGGTGGCAACCAGATGGAGACATGGGTGTGGAAACCAGAGTGATAGGAACATTTGGGTATTTGGCGCCAGAATACGCTCAGAGTGGTCAAATTACTGAAAAAGCTGATGTGTACTCGTTTGGTATAGTACTGCTGGAACTCATCACAGGAAGAAAAGCAGTGGATATAAACCGCCCCAAAGGCCAACAATGTCTCAGTGAATGGGCACGGCCATTGCTTGAAAAACAAGCTATTTATAAATTAGTAGATCCGAGTTTAAGAAACTGCTATGTTGATCAAGAGGTACATCGCATGCTGCAATGTTCCTCTTTATGCATTGGACGGGATCCTCATTTAAGGCCTCGAATGTCACAGGTGCTGAGGATGCTGGAAGGTGACATTCTACTGTGA 2034 0.4425 MSSQKGRHEEEMGTSETTGKVVVVAVKASRDISRTALVWALTHVVQPGDCIKLLVVIPALSSSKRVWGFSRFTTDCASSNWRSSLGTASDQKEVITKSCSQLVLQLHDFYDPEKIKIRVKILSGSSCGGVAAEAKRVESSWVILDKKLKHEKKYCMEQLHCNIVMMKRSRPKILRLNLNSSPKMELNMGCPLKLRRNLKENTGHGGIIRGPAVTPASSPEQGSPPLTATDVGTSSISSSDPATSPFFHSDNYERQRRGFTFVHEGLTNLEDIESDSESEKLSMSSKSSYFQPWIANVICMDGDFSKHEDNVQRSSDKTLATAYEALLQKFSKLDEDPILGMLNCKIDVNLSKSVREAISLAKGSPPGPPPLCSICQHKAPVFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLHDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVENGRRLLVYEYICNGSLDSHLYRRKQNVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELITGRKAVDINRPKGQQCLSEWARPLLEKQAIYKLVDPSLRNCYVDQEVHRMLQCSSLCIGRDPHLRPRMSQVLRMLEGDILL 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03965 677 SUPERFAMILY Protein kinase-like (PK-like) 381 672 IPR011009 -
Vian1g03965 677 ProSiteProfiles Protein kinase domain profile. 401 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g03965 677 FunFam Dual-specific kinase DSK1-like 13 167 - -
Vian1g03965 677 Pfam Protein tyrosine and serine/threonine kinase 405 671 IPR001245 GO:0004672|GO:0006468
Vian1g03965 677 CDD STKc_IRAK 407 673 - -
Vian1g03965 677 ProSitePatterns Tyrosine protein kinases specific active-site signature. 522 534 IPR008266 GO:0004672|GO:0006468
Vian1g03965 677 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 373 476 - -
Vian1g03965 677 Gene3D Transferase(Phosphotransferase) domain 1 477 675 - -
Vian1g03965 677 PANTHER OS01G0750732 PROTEIN 316 675 - -
Vian1g03965 677 MobiDBLite consensus disorder prediction 216 249 - -
Vian1g03965 677 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 477 677 - -
Vian1g03965 677 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
Vian1g03965 677 MobiDBLite consensus disorder prediction 203 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03965 Vian-Chr1 62775344 62778518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03965 381 675 Trihelix Transcription Factor Family AT1G70460 51.495 2.28e-98 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Vian1g03965 PK_Tyr_Ser-Thr 8.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03965 - - gmx:100305413 1263.06