Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03878 ATGAGTTCAGATTCGATTAGAGAACGAGGTGCATCTGCCGTGGTAGAACGGAAATTTCAATATAGACAACTTTTATTTTTGGCATACCAAAGTTTAGGCTTTTTGTTTGGTGACTTGAGCTTATCCCCTCTATATGTCTATCAAAGTATATTTTCCGGAAGACTGAAACATGTCCTGAATGAGGATGCAATATTTGGCGCATTTTCTCTGATCTTTTGGACTCTTTCGATTATTTCTTTGTTGAAGTATGCACTTATTATGTTAAGTGCAGATGATAATGGCGAAGGTGGAGTTGTTGCTTTATATTCACAGCTTTGCAGAAGTGCAAAATTATGTTTGCTTCCTAATCATCAAGCATCCGATGAGGAGCTTTCTACGTATCGCAAGCCTGGCTCCTCAAATGGAAGTACACCATCCTCGCCTTTGAAAAGATTCATTGAGAAACACAAGAATACAAAGATGGCTTTGCTTATTTTTGTATTACTAGGTGCTTGCATGGCAATTTGTGTTGGTGCACTCATGCCTGCCATTTCTGTTCTTTCATCCGTTGAAGGCTTGAAAATTGAAGCAAAGATTACAAATAAAAGTATGATGTCTTGTATTTCTTGTGTTCTACTGATTGGACTCTTTGTCATGCAACATCGGGGCTCCTACAAGGTTGCATTCGTGTTTCCTCCTGTAATCATCCTATGGCTAGTAACTATTTTCATGATTGGCATTTACAATATCATCAAGTGGAACCCAAGAGTATATCAGGCTCTTTCTCCATATTATGTATACAAGTTCTTTATGCTTACAGGAAAAGATGGTTGGACTAACCTTGGAGGAGTATTTCTATGCGTTACAGGGACTGAAGCTATGTTTGCAGACCTTGGTTACTACAGACAAACACCTGTAAGGGTTACATTTTGTTGTATCATTTACCCATGTCTAGTTCTTCAATACATGGGGCAGGCGGCCTTCCTTTCCAAGAATCTATCTGCAGTACCTATAAGCTTTTATGCTTCTATTCCAGATGTTCTCTTTTGGCCAGTATTTGTGGTGTCTGCTTTGGCAGTAATAGTTGCAAGTCAGGCTGTCATTGCTTCAACATTCTCTGTAGTCCAACAATGTCATGCATTTGAATGTTTCCCTCGGGTTAAGGCAGTACATTCCAGAAGGTGGATCCCTGGCCAGACATATATACCAGAGATAAACTGGATTCTTATGATAATCAGCTTGGCTGTGACATTTGGTTTAGAAGACAAGAACCGTATAGGATATGCTTATGGAATTGCATATCTAATTCTGGTGTTTGTGACCACATGTTTGACATCACTAGTCATCATCCTTGTATGGCATCAAAGTCCTATAATTGCTCTGGCATTTGCTCTGTTCTTTGGTTCGATAGAGATTATTTTCCTGTCATCCTATTGCACGAAAATCCCCAGAGGTGGCTGGATTCCACTTGTGCTTTCGGCGGTCTTCATGTTTGTTATGTACGTGTGGCATTATGGTTCTAGGAAAAAGTATCTACTTGACATGCATGACAAAATTTCGATGAGGTCCATCCTTGGATTAGGTCCTAGTCTTGGGATTGTTAGAGTTCCTGGAATGGGCCTTATTTACACTGAATTGGCTACTGGAGTCCCTGCCAGTTTTTCTCATTTCTTGACAAATCTGCCAGCATTCTACCAAGTGGTTGTTTTTGTTTGTGTGAAGACTGTACCGGTGCCTTGTGTGCCGCATGAAGAACGTTACCTCATTGGCCGAATTGGTCCCAAATCTTTCCGAATGTACCGTTGTATTGTTCGAAATGGCTATAAAGATGTGTATAGCCACGAAAATGATTTTGAAAATGACCTAGTGATGAGCATAGCTGAATTCATTCAATTGGAAGCAGAAGGTGCCTCTGGAAATGCAGAGGGTTCAGTGGATGGACGGATGGCAGTGGTTAGGACATCAGGGAAATTTGGGACACGATTGCTTATGTCCGAATCTTCTGCTTTTGAGGAACGCAACAATATTAATCTTCCTGGAGCTTTGACTGTTACTAGCAGTAAATCCCCGACATTGAAGAGGCTGCAGGCAATGTACGAGCAGGAGTCACCTGAACTCAACACTGGACGGCGAATTCGATTTGAGTTGCAAAATGTAATATATAAAGACCCACGTGTCAAGGAAGAACTCATGGAACTTGTAGAAGCCAAGCGCATTGGAGCAGCGTATGTAATAGGTCATTCTCACGTAAAGGCCAAGTGGAACTCATCATTTATAAAGAAGTTTGCTATCAACCTCTACTCTTTTCTGCGGAAAAATTGTCGGTCTCCTGCAGTGGGTCTAAACATTCCTCAGATTTCTCTGATTAAGGTTGGAATGAATTACCATGTGTAG 2373 0.4092 MSSDSIRERGASAVVERKFQYRQLLFLAYQSLGFLFGDLSLSPLYVYQSIFSGRLKHVLNEDAIFGAFSLIFWTLSIISLLKYALIMLSADDNGEGGVVALYSQLCRSAKLCLLPNHQASDEELSTYRKPGSSNGSTPSSPLKRFIEKHKNTKMALLIFVLLGACMAICVGALMPAISVLSSVEGLKIEAKITNKSMMSCISCVLLIGLFVMQHRGSYKVAFVFPPVIILWLVTIFMIGIYNIIKWNPRVYQALSPYYVYKFFMLTGKDGWTNLGGVFLCVTGTEAMFADLGYYRQTPVRVTFCCIIYPCLVLQYMGQAAFLSKNLSAVPISFYASIPDVLFWPVFVVSALAVIVASQAVIASTFSVVQQCHAFECFPRVKAVHSRRWIPGQTYIPEINWILMIISLAVTFGLEDKNRIGYAYGIAYLILVFVTTCLTSLVIILVWHQSPIIALAFALFFGSIEIIFLSSYCTKIPRGGWIPLVLSAVFMFVMYVWHYGSRKKYLLDMHDKISMRSILGLGPSLGIVRVPGMGLIYTELATGVPASFSHFLTNLPAFYQVVVFVCVKTVPVPCVPHEERYLIGRIGPKSFRMYRCIVRNGYKDVYSHENDFENDLVMSIAEFIQLEAEGASGNAEGSVDGRMAVVRTSGKFGTRLLMSESSAFEERNNINLPGALTVTSSKSPTLKRLQAMYEQESPELNTGRRIRFELQNVIYKDPRVKEELMELVEAKRIGAAYVIGHSHVKAKWNSSFIKKFAINLYSFLRKNCRSPAVGLNIPQISLIKVGMNYHV 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03878 790 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 20 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian1g03878 790 Pfam K+ potassium transporter 29 603 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian1g03878 790 NCBIfam potassium uptake protein 27 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03878 Vian-Chr1 61927040 61934972 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03878 14 790 Inorganic Solute Cotransporters AT4G23640 59.898 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03878 K03549 - gmx:100777998 1377.46