Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03876 ATGGACGTGAGGTTGAAATCATTTTTGGGATTTGCTGCTAATCATTCTGCAAATGCATTCAAGATTTTGGGCAATTCTATGCAAGCTGAAGGAAGGGGAGCTGATCAGTATGGTACAGATACCATCTTACGACTTGATTCCCCTGGTTCTTCAATTCCCACCCATGTTCCCTCTCCTAAGGGAACAAAAAGGAAGTGGGATTTAATTGATGGATGTATGGGTCAAAGAGTCGACTCATCTTTGTCACTTGGGCTTGGGCGTTCAACCAGTTCCTCTGATAGCAAGGGTAGTTCGGCTGCTGCTTGCACAGCTGTGTCTTCAGCCAAAGATGTTGATGAGGAATCATCTATGGATATTGAACTGGACTTTTCTCTCCATCTTGGCTGTGAGAAGGTACAAAGCCAGAAGAAACTTGTTAATTCAAGTTTGAAGACACTGGAGCTGCAACCAAAATTTGATTTGGAATTAAGCCTTTCTACTGGGCCCTGTGAGTCAGATATTACAAGCATACATCTAAATCCTTCACCTCTTCAATTGAATATGGAGATGCCATTAGCGTTCAGTGGGACACAGAATGCAGACGAGGGATCAACTTCATGTAGTTGGAAGCCAGGGATTGTTTTGCCATCTTCAAAGACGGCATCAAATACAGGCACTAGTTTTCTTCTAAATCAGGCTTCAGAGCAGTTTGATCATAGTCCCGTTGTTCTGGATCTCTCGTCAACCAGACCTAAAAGTTCAGTTACCTGCACTTCTGGGCTTACACAGCAGCAACAGCCACTGCGCCCCAGTAATTCTAAAACATGTCAAGTGGAGGGATGCGGAAAGGGTGCCAGAGGAGCTTCTGGAAGATGTATATCTCACGGTGGGGGTAGGAGGTGTCAGAAACCTGGCTGCCACAAAGGAGCCGAGGGTCGCACGGTTTATTGCAAGGCACATGGAGGTGGCAGGCGATGTGAATTCCTTGGTTGCACAAAGAGTGCAGAAGGACGTACAGATTTCTGTATTGCCCATGGTGGTGGCCGGAGATGCAGTCATGAAGGCTGTACCCGGGCTGCCAGAGGGAAATCTGGATTGTGCATACGACATGGTGGTGGTAAGAGGTGCCAGAGAGAAAACTGCACCAAGAGTGCCGAAGGTCTATCAGGCCTTTGTATCTCACATGGTGGAGGTCGTCGATGCCAGGCTCCTGGATGTACAAAAGGGGCACAAGGGAGCACAATGTTTTGCAAAGCACATGGTGGGGGAAAACGGTGTACAGCACCAGGGTGCACCAAAGGCGCTGAGGGGAGCACCCCTTATTGCAAGGGCCATGGAGGGGGAAAACGCTGTACGTATCAGGGTGGTGGTGTATGTACTAAAAGTGTGCATGGAGGTACCAACTTCTGTGTGGCACATGGGGGTGGAAAGAGGTGTGCTGTACCAGGATGCACAAAAAGTGCTAGAGGAAGGACTGATCATTGTGTCCGCCATGGTGGAGGCAAGAGATGCAAGTTTGTAGGGTGTGGAAAGAGTGCTCAAGGCAGCACTGACTTTTGCAAAGCACATGGGGGAGGCAAGAGGTGCTCTTGGGGCCATCCTGGTTCAGAGTATGGTATTCAACAGGATGGTCCTTGCAATTCGTTTGCAAGGGGGAAAACAGGTATGTGTGCTCTTCATAGTGGGCTGGTGCATGATAAGAGGGTTCACGGAGGTATCTCACTGGCATCTGTTGTTCAGAATCCTCATTCGAGTAAAACAGATGAACTAAAACAGTTACTCGTTGACAAAAACATGGATATAGATATGATGAAAATAGGGAGTAGCCTTGGCTCGGCTGCAACCTGCTCTGACTTCAAGCAGTTTGAAGCTGTAACTGCTCATATCTCAGCCAAGGAAGGTGGTCACCTGCCAATGTCAGTTGCTGTTCCTGAAGGCAGGGTGCATGGTGGAAGTCTGATGGCAATGCTGACTGGGAGTTCTAGCCGTGGCACAAGCAGCGGGAGAAGTCTAGTTAGCGATCCATCCGAACCAATCAAAGGTTATCCCATGCCCCAGAATTGGATGGAAAGCTAG 2055 0.4847 MDVRLKSFLGFAANHSANAFKILGNSMQAEGRGADQYGTDTILRLDSPGSSIPTHVPSPKGTKRKWDLIDGCMGQRVDSSLSLGLGRSTSSSDSKGSSAAACTAVSSAKDVDEESSMDIELDFSLHLGCEKVQSQKKLVNSSLKTLELQPKFDLELSLSTGPCESDITSIHLNPSPLQLNMEMPLAFSGTQNADEGSTSCSWKPGIVLPSSKTASNTGTSFLLNQASEQFDHSPVVLDLSSTRPKSSVTCTSGLTQQQQPLRPSNSKTCQVEGCGKGARGASGRCISHGGGRRCQKPGCHKGAEGRTVYCKAHGGGRRCEFLGCTKSAEGRTDFCIAHGGGRRCSHEGCTRAARGKSGLCIRHGGGKRCQRENCTKSAEGLSGLCISHGGGRRCQAPGCTKGAQGSTMFCKAHGGGKRCTAPGCTKGAEGSTPYCKGHGGGKRCTYQGGGVCTKSVHGGTNFCVAHGGGKRCAVPGCTKSARGRTDHCVRHGGGKRCKFVGCGKSAQGSTDFCKAHGGGKRCSWGHPGSEYGIQQDGPCNSFARGKTGMCALHSGLVHDKRVHGGISLASVVQNPHSSKTDELKQLLVDKNMDIDMMKIGSSLGSAATCSDFKQFEAVTAHISAKEGGHLPMSVAVPEGRVHGGSLMAMLTGSSSRGTSSGRSLVSDPSEPIKGYPMPQNWMES 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03876 684 PANTHER EMB|CAB89363.1 267 303 - -
Vian1g03876 684 MobiDBLite consensus disorder prediction 651 684 - -
Vian1g03876 684 MobiDBLite consensus disorder prediction 651 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03876 Vian-Chr1 61897003 61899057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03876 392 555 WRKY Transcription Factor Family AT4G12020 54.878 3.53e-49 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03876 - - gmx:100776565 1303.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00224 10 1971068 1973062 Vian1g03876 1 61897003 61899057 PCT