Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian1g03851 | ATGTCGCGGCGCACTCGCGATGATGGAAGGACATGGTCTGAAGGTTCTCGCGACGATGTCCATGGTAGTGCGAGGTTTCTGCAATTTTGTGCTTTGATTGACAAAGAAGATGATGGGGTGTGTCGCGATTCTGATGGTGGTGGCTGTGGAGGCTCGCGACTCTGCAACGGCACTAACAGTGTAGATGAACAGCGGTGCTCTACCCTCATGGGTTTCCCTGTGGGCTACACGGAGCTTCTCTTCCCGAAGCTTCTCCTCCAACTCCTCTCCGTCTTGGGCTTCCTCCGGAGGCTCATTTGCACCGTCCTCCGTTTCATGGGCCTCCACGATTTCCTCGAGCCCGACATTGCTTGGCCCGAAGCCCACACCGGAATGCCAGAATTCGAATCCGTCTCCGCCACGTTTATCCGGGAAATCCTCCCCGTAGTTAAGTTCCACGACCTCCTCGACCCACCCGAAACCTGCGCCGTCTGTCTCACGGAGTTCGAGAAAAACGATGAGATCAGACGGCTGGCCAACTGTCGACACATATTCCACCGAGGATGTTTGGACCGTTGGATGGGTTACGATCAGAAAACGTGCCCTCTTTGCAGAACACCCTTCATACCGGACGATATGCAAGGTACTTTCATTGAAAGACTCTGGGCTGCGTCTGGGATCTCTGAACAGCCTCTTGTTCCTGCTTCCTAG | 690 | 0.5464 | MSRRTRDDGRTWSEGSRDDVHGSARFLQFCALIDKEDDGVCRDSDGGGCGGSRLCNGTNSVDEQRCSTLMGFPVGYTELLFPKLLLQLLSVLGFLRRLICTVLRFMGLHDFLEPDIAWPEAHTGMPEFESVSATFIREILPVVKFHDLLDPPETCAVCLTEFEKNDEIRRLANCRHIFHRGCLDRWMGYDQKTCPLCRTPFIPDDMQGTFIERLWAASGISEQPLVPAS | 229 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian1g03851 | 229 | ProSiteProfiles | Zinc finger RING-type profile. | 155 | 198 | IPR001841 | - | |
Vian1g03851 | 229 | Pfam | Ring finger domain | 154 | 198 | IPR001841 | - | |
Vian1g03851 | 229 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 96 | 215 | - | - | |
Vian1g03851 | 229 | SMART | ring_2 | 155 | 197 | IPR001841 | - | |
Vian1g03851 | 229 | SUPERFAMILY | RING/U-box | 136 | 204 | - | - | |
Vian1g03851 | 229 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 149 | 201 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian1g03851 | Vian-Chr1 | 61562849 | 61566711 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian1g03851 | 70 | 225 | C3H Transcription Factor Family | AT1G63840 | 56.790 | 6.70e-57 | 176 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian1g03851 | K16281 | - | gmx:100789020 | 255.758 |