Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03832 ATGGCGAAAAGATCTCCTACTCGGGTTAACCAAACGTACGAGACAGGTTGTACGTGGCGAATGTTTAGAATCTTTAATTTTCGTGAAAGTCGTTCCGACAGAAGATTGCATTTGAATGCTCATGCTAATGCCGCAGAAAATGGAAAATCCAGAAGTAACTCAGGTGCGGCCAGCACAGTTGATGAGAAGTGCCTTCAAATTGGTGTGAGTCCCAGAAGAAGAGATTACATCTGTAGAAGTATCAACAGCATGGTGAATGATCAGGTAGAAGATTGGGAAAATGAAGTAAAAAAGATGATTGTTGATCACAGATTTGTCAATACACATTATCAAGGCAAAGATGGAGCAGGCTGCCAGCCTAATCAAATCCTGGATGCTTTACAGATTTTATATACAAACAAGGAACTTTTCATTAAACTTCTGCAAGATCCAAACTCTTTGTTAGTAAAACAGATTCAGGAATTACAGAGTTCTCAAGTGAAAGAACCATGCCAGCATGCAAGGCAGAAAATGATGAGTAGATTAAATAAGCCTCAAAATACTGATGCTACACAATGTGCAAAACCTTTTAGTTCCTCTGATAGATCTGATTTGAGGTCAAACAGAATAGTAGTTTTGAAGCCTGGCACTGTTAATGTGGAAAATTCTGTAGAAACAAGCTTTGTTAGCCCTCCACATTCGCCTAATAGCTTCAGTTCTAATGCACAAAATACTAGGCTTTCACATTTTCCCTTCAGTTGTATAAAGAGAAAATTGAAGCATGTTATGAAAGTAAGGAGACAAGAACAGCAGTTGAAGACAGCTGATGGAATACCAACTAGACTTTCCTCCAGTTCAAAGGGCCTGGGAGATGGAAAAAAAGTAAAAGCATTGGAAATTTCTGAAAGAAACTCACCAATTCATGCCCTTAGTAATACTGGAAAATGGTTGAATTCATATCATGATTTGAAGAAGAAGAAGAGGGAGAACATTATCATGTTCAAGGATTCTGCGTTATCTATGGGGCAGGAAGCAGCTTCTTTTGGTGAAAGTTGCAGTAAGAATACTTCAGTTAGCCCTCGTGAAGAAAATATATTGAAAATGCACGTTGAAAGTAGGAAGAGTCGGTCTCAGATGTTGAACTGTGGAATTGAGGAAAATTTTGAAGAAGACATTAATCTTAAAAATAGTGTTCTTAGCCACAATCTCCATGCATATTATGATATTCCCAAAGATGGCAGATACATGGACAGTCCTACTCAGATCATCGACATGAATAATATAATCAGAGGAAGTGGATCCTTTCTGGATTTGCGTCCAGAGATCCAGACGTTGTCTTTTTCATCAGATGTTTCATCAAGCCAATCCTGTCAGAGAACAGATAATATTGTAAACATGGGAAACAAAGTTGAACATCCTAATAATGAATCTTTTGATGAACATTTTATTAAGGATGATGTTACCAACCTTCCAATCACAATCATTCAACCAGATGAGTCACCAGAAAAGAGAATGCATGAAAAAATTGAAGAGAACCATTTTGAAGACCTTTTAAGACTCTCTTTTGATTCAATGAACGATTTAGTCTCCTCCAAGGACGACATCATAGACTATGTAAGGGAAATTCTGCATGCTTTCAACCTTACTCTGAAGAGATCATCTGACCAATTGCTGGATCCATCCACCTTTGAACTGAAGGAAAAACCTAGCCTACTTTCTGGTGGAACAATCTTGCATGACTGTGTCATAGAATGTTTCATGCAGGTATACCAGAATAGTGGTTTCCCACTTCACGTTGGAAACGTCCAAGCGTATGTTTTGAAGAAACTTGTGGTTAAAGAGATCACTGGACTCGTTAACTTGCACTGTCACTCTCATCCATCAACTTTAACGTTAGAACAGCTTGTTGAAAAGGACTTGGCAAGACGTGGTTCGTGGCTAAATATCCAAGTTGATTCAGAAGATATTGCAGTAGAGCTGGAGAAACATGTTCTTGAAAAACTGGTATTGGAAATTGCGTCTGAGATGAATTACCAGAAACATGACACATTGCATTAA 2037 0.3824 MAKRSPTRVNQTYETGCTWRMFRIFNFRESRSDRRLHLNAHANAAENGKSRSNSGAASTVDEKCLQIGVSPRRRDYICRSINSMVNDQVEDWENEVKKMIVDHRFVNTHYQGKDGAGCQPNQILDALQILYTNKELFIKLLQDPNSLLVKQIQELQSSQVKEPCQHARQKMMSRLNKPQNTDATQCAKPFSSSDRSDLRSNRIVVLKPGTVNVENSVETSFVSPPHSPNSFSSNAQNTRLSHFPFSCIKRKLKHVMKVRRQEQQLKTADGIPTRLSSSSKGLGDGKKVKALEISERNSPIHALSNTGKWLNSYHDLKKKKRENIIMFKDSALSMGQEAASFGESCSKNTSVSPREENILKMHVESRKSRSQMLNCGIEENFEEDINLKNSVLSHNLHAYYDIPKDGRYMDSPTQIIDMNNIIRGSGSFLDLRPEIQTLSFSSDVSSSQSCQRTDNIVNMGNKVEHPNNESFDEHFIKDDVTNLPITIIQPDESPEKRMHEKIEENHFEDLLRLSFDSMNDLVSSKDDIIDYVREILHAFNLTLKRSSDQLLDPSTFELKEKPSLLSGGTILHDCVIECFMQVYQNSGFPLHVGNVQAYVLKKLVVKEITGLVNLHCHSHPSTLTLEQLVEKDLARRGSWLNIQVDSEDIAVELEKHVLEKLVLEIASEMNYQKHDTLH 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03832 678 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 68 - -
Vian1g03832 678 Pfam Protein of unknown function (DUF3741) 103 146 IPR022212 -
Vian1g03832 678 Pfam Domain of unknown function (DUF4378) 530 664 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03832 Vian-Chr1 61358631 61361807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03832 484 652 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 28.042 1.88e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03832 - - vra:106768413 1219.14