Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03817 ATGAAGCTGAAGGTTTATGCAGATCGAATGTCGCAGCCATCCCGTGCGATTCTCATATTCTGCAAAGTGAATGGAATAGATTTTGAGGAGATCAAAGTCGATTTATCCAAACGTCAGCACTTATCTCCCGAATTCCAAGCAATTAACCCTTTAAGGAAAGTCCCTGCAATTGTTGATGGAAGGTTCAAGCTATTTGAGAGTCATGCAATTCTCATATATCTTGCATCTGCGTTTCCGGGAGTTGCAGACCATTGGTACCCAGCCGATCTTTCCAGGAGAGCAAGAATTCACTCCGTGTTAGATTGGCATCATCAGAATTTGCGGCGTGGGGCAGCTGGATTTGTTCTAAATACTGTACTAGCGCCAATGTTGGGTCTACCACTGAACCAACAAGCAGCTGCTGAAGCTGAGAAAATTTTGATTTCATCTTTGACAAAAATAGAAAACATTTGGCTTAAGGGGAACGGAAAGTACTTGCTTGGTGGCTTACGCCCATCCATAGCAGATCTCAGTCTGGTTTGCGAAATTATGCAATTAGAGCTTTTAAATGGGAAGGACCGTGATCGTATCCTTGGCCCGCACAAGAAAGTTCAGCAGTGGATAGAGAGCACAAGAAATGCAACGATACCCCACTTTGAAGAAGTTCATAAAATCCTCTATAGGCTCAAAACGAAGCTTTCTGAACAGCAGTCTAATCAGGCAGATAGCGTAATGGAATCTAGGATTCGAACCCCACTGACTTCAAAAATGTGA 753 0.4329 MKLKVYADRMSQPSRAILIFCKVNGIDFEEIKVDLSKRQHLSPEFQAINPLRKVPAIVDGRFKLFESHAILIYLASAFPGVADHWYPADLSRRARIHSVLDWHHQNLRRGAAGFVLNTVLAPMLGLPLNQQAAAEAEKILISSLTKIENIWLKGNGKYLLGGLRPSIADLSLVCEIMQLELLNGKDRDRILGPHKKVQQWIESTRNATIPHFEEVHKILYRLKTKLSEQQSNQADSVMESRIRTPLTSKM 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03817 250 SUPERFAMILY Thioredoxin-like 1 87 IPR036249 -
Vian1g03817 250 CDD GST_C_Theta 92 222 IPR040077 -
Vian1g03817 250 FunFam Glutathione S-transferase theta-1 83 231 - -
Vian1g03817 250 SFLD Main.4: Theta-like 1 231 - -
Vian1g03817 250 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 246 IPR010987 -
Vian1g03817 250 SFLD Main (cytGST) 1 231 - -
Vian1g03817 250 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Vian1g03817 250 Pfam Glutathione S-transferase, N-terminal domain 1 75 IPR004045 -
Vian1g03817 250 Gene3D - 83 246 - -
Vian1g03817 250 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 1 236 IPR043377 -
Vian1g03817 250 CDD GST_N_Theta 3 78 IPR040075 -
Vian1g03817 250 SUPERFAMILY GST C-terminal domain-like 83 217 IPR036282 -
Vian1g03817 250 MobiDBLite consensus disorder prediction 231 250 - -
Vian1g03817 250 FunFam Glutathione S-transferase theta-1 1 80 - -
Vian1g03817 250 Gene3D Glutaredoxin 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03817 Vian-Chr1 61234912 61237428 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03817 1 223 Glutathione S-transferase Gene Family AT5G41210 73.094 4.37e-127 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03817 K00799 - gmx:547979 451.44