Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03816 ATGATGATGGAAAAGCTGAAGGTGTTTGCGGATCGAATGTCCCAGCCTTCTCGAGCAGTTCTCTTATTCTGCAGGTTGAACGGAATTGACATCGAGGAGATCAAAGTAGACATTTCCAAAGGCCACCACCTCTCTTCTGAATTCAGAGAAGTAAACCCTCTGCAGAAAGTTCCGGCTATTGTTCATGGAAGCTTCAACCTCTCCGAGAGGTACCCAAGCGATATTTTCAGGAGAGCAAAAATTAACTCGGTAATGGATTGGCATCACTCTAATTTACGACATGGAACAGTGAACTACGTAGTAAATACTGTACTAGGACCAGCAACTGGCCGTCCACTTAATCCAAAAGCAGCTGCTGAAGCAGAAAAAGTGCTATTTTCTTCTTTATCAAAGCTAGAGGATATTTGGCTCAATGGAGATGGACGCTTCCTGCTTGGTGTCTCTCAGCCATCTATAGCAGATCTCAGCATGGTTTGTGAACTTATGCAACTTGAGGTTTTGGATGAGAAGAATCGCAGTCGTATATTATCCCCATACAAGAAAGTTCTTCAGTGGATTGATGATACAAGAGCAGCAACAAATCCTCACTTTGAAGAAGTGCATAATATCCTTTATAGAGCTAAAAGGAAATTTGAACAGCAGCGTTCAAGGGTAGCTGAAACTTGGACTGAGCCTAGCGACAAGAGAGGTGGACATTCAAAGATGTGA 708 0.4294 MMMEKLKVFADRMSQPSRAVLLFCRLNGIDIEEIKVDISKGHHLSSEFREVNPLQKVPAIVHGSFNLSERYPSDIFRRAKINSVMDWHHSNLRHGTVNYVVNTVLGPATGRPLNPKAAAEAEKVLFSSLSKLEDIWLNGDGRFLLGVSQPSIADLSMVCELMQLEVLDEKNRSRILSPYKKVLQWIDDTRAATNPHFEEVHNILYRAKRKFEQQRSRVAETWTEPSDKRGGHSKM 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03816 235 Gene3D Glutaredoxin 1 71 - -
Vian1g03816 235 Pfam Glutathione S-transferase, N-terminal domain 5 69 IPR004045 -
Vian1g03816 235 MobiDBLite consensus disorder prediction 216 235 - -
Vian1g03816 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 108 IPR004045 -
Vian1g03816 235 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 5 222 IPR043377 -
Vian1g03816 235 CDD GST_C_Theta 77 206 IPR040077 -
Vian1g03816 235 SUPERFAMILY Thioredoxin-like 3 69 IPR036249 -
Vian1g03816 235 FunFam Glutathione S-transferase theta-1 68 216 - -
Vian1g03816 235 Gene3D - 72 224 - -
Vian1g03816 235 SUPERFAMILY GST C-terminal domain-like 71 201 IPR036282 -
Vian1g03816 235 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 74 211 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03816 Vian-Chr1 61231308 61233779 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03816 3 215 Glutathione S-transferase Gene Family AT5G41210 56.710 1.26e-95 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03816 K00799 - gmx:100799229 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g03816 1 61231308 61233779 Vian1g03816 1 61231308 61233779 ECH