Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03782 ATGGAGTTTGTGAAGAAGTGGAAGAGAGTACTGGGAAGAAGCAAGAGATTGTATCCGGAGAACAGCGTAAGTGGAAGCTATGGCAGATTGAGAAACAAAGAAAGACAACATAGGAAGAAGGCTTGTGTGGCTCCACAAGGTTGTCTTTGTGTCTACGTTGGACCCGAGAGAGAGAGATTCGTTATCAAGATCGAGATAGCGAACCACCCTTTGTTCAAAGAGCTTCTGGATGGTGCTGAGAGAGAATATGGGTATAGAAACGATGGTCCCTTGTGTCTCCCTTGCCACGTTGACTTGTTCTGTGAAGCACTGACGGAGATGGAAATCGGCACCGCGGAAGAAGGTGTTATGGGTTCTCGTAGTTACAGGCACAATTCATGTTCAGTTTCTGATACCAGATGTAGATATTCGAGAGGGTCTTTCTCTGATTGTTATTATGAAAACCTTGTGAATTGA 456 0.4474 MEFVKKWKRVLGRSKRLYPENSVSGSYGRLRNKERQHRKKACVAPQGCLCVYVGPERERFVIKIEIANHPLFKELLDGAEREYGYRNDGPLCLPCHVDLFCEALTEMEIGTAEEGVMGSRSYRHNSCSVSDTRCRYSRGSFSDCYYENLVN 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03782 151 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 104 IPR003676 GO:0009733
Vian1g03782 151 Pfam Auxin responsive protein 5 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03782 Vian-Chr1 60817542 60817997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03782 20 100 Calmodulin-binding Proteins AT4G34750 39.560 2.35e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03782 K14488 - gmx:102667331 158.688