Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03769 ATGGGTTGCGTCCTTCGAAAGCCGGCGGGTTCTGTCGACAGTCGCCGGGATAAAACTTCGACCTCCGTCGGCGGGAATAATGCCGTTAAGATTCAGGAGAAGCAGGAGACTGTGCACGCCGGCGAACTTTCCGGCGTTATTCTGGCGCCGGAGCGCCGGAGACGTCGACTTGACTCATTCACGACGAGTCACCAAGGGTGGCCGCCGTGGCTGATGGTCGTCGCCGGCGACGCACTTGGAGACTGGACTCCTCGCCGTGCCAACACGTTCGAGAAGCTTGCTAAGATTGGGCAAGGGACTTATAGCAATGTGTACAAAGCAAGAGACCTTGTAACTGGGAAAATAGTGGCTTTGAAGAAGGTTAGATTTGACAATTTGGAGGCAGAGAGTGTGAAGTTCATGGCAAGAGAGATTCTTGTTTTGAGGAGGCTTGATCACCCCAATGTTGTGAAGCTTGAAGGGTTGGTTACTTCAAGAATATCATCCAGTCTTTACTTGGTATTTGAGTACATGGAACATGATCTTGCTGGTCTTGCAGCTGGTGTGGGTGTCAAATTCTCTGAGCCACAGCTTCTTCTGGGGGCTACATCCTATGGCATTGGTGTCGACCTTTGGAGTGCTGGCTGCATTTTAGCAGAACTTCTTGCTGGAAAGCCAATCATGCCTGGCCGAACAGAGGTTGAGCAGCTGCACAAGATATTTAAGTTATGTGGCTCTCCATCTGAGGAATATTGGAAGAAATATAGATTGCCAAATGCTACACTCTTTAAGCCGCAGCAACCTTATAAAAGAAACATCTTAGAAACATTCAAGGATTTCCCTTCTTCGTTGCCTCTGATTGAAACTCTTCTTGCAATAGATCCTAATGATCGTGGCACTGTCTCATCTGCTCTAAATAGTGAGTTCTTTACCACTGAGCCATATACTTGTGAACCATCTAGTTTGCCAAAGTATCCTCCTACCAAAGAATTGGATATAAAACTGAGAGATGAAGAAGCAAGAAGGCAAAAAACTCTAAGTGGAAAAACTAATGCAGTTGATGGTGCCAAAAGGGTTAGAGTACGCGAGCGTAGTTTGGCCATTCCGGCCCCAGAAGCCAATGCGGAAATTCAAACGAACTTAGATCTTTGTCTTATTTGCTTCCTTGAGCAAAATTACAATTTACAAGTGTCTTTTCAGAGGTGGAGAGTTGTGACCCATGCAAATGCAAAAAGTAAGAGTGAGAAATTCCCACCTCCTCATCAGGATGGAGCTGTTGGATATCCACTTGATGCATCAAACAAAGGAGCTGTTTCATTTGGAGCCACCGAAACATCCACAGCCTCTACCATATTTCATTCAAAATCTTCTGGATCTGTTAAAAGTCACGATCCTGCCAAAGACAAAGTGGGGAGAAGTAATACTGCAGACACCCAGATGACTTCACCTTGGAAATTTTTGCGTTCATTCAAGCTATCAACAATTGGTCATTCATTTGATTCATTATTTAGAAGCAATTAA 1500 0.4527 MGCVLRKPAGSVDSRRDKTSTSVGGNNAVKIQEKQETVHAGELSGVILAPERRRRRLDSFTTSHQGWPPWLMVVAGDALGDWTPRRANTFEKLAKIGQGTYSNVYKARDLVTGKIVALKKVRFDNLEAESVKFMAREILVLRRLDHPNVVKLEGLVTSRISSSLYLVFEYMEHDLAGLAAGVGVKFSEPQLLLGATSYGIGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKYRLPNATLFKPQQPYKRNILETFKDFPSSLPLIETLLAIDPNDRGTVSSALNSEFFTTEPYTCEPSSLPKYPPTKELDIKLRDEEARRQKTLSGKTNAVDGAKRVRVRERSLAIPAPEANAEIQTNLDLCLICFLEQNYNLQVSFQRWRVVTHANAKSKSEKFPPPHQDGAVGYPLDASNKGAVSFGATETSTASTIFHSKSSGSVKSHDPAKDKVGRSNTADTQMTSPWKFLRSFKLSTIGHSFDSLFRSN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03769 499 PANTHER CELL DIVISION PROTEIN KINASE 88 179 - -
Vian1g03769 499 ProSiteProfiles Protein kinase domain profile. 90 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g03769 499 SUPERFAMILY Protein kinase-like (PK-like) 84 308 IPR011009 -
Vian1g03769 499 FunFam probable serine/threonine-protein kinase At1g54610 77 172 - -
Vian1g03769 499 MobiDBLite consensus disorder prediction 447 469 - -
Vian1g03769 499 MobiDBLite consensus disorder prediction 1 27 - -
Vian1g03769 499 Gene3D Phosphorylase Kinase; domain 1 77 172 - -
Vian1g03769 499 Gene3D Transferase(Phosphotransferase) domain 1 188 320 - -
Vian1g03769 499 Pfam Protein kinase domain 186 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g03769 499 Pfam Protein kinase domain 90 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian1g03769 499 ProSitePatterns Protein kinases ATP-binding region signature. 96 119 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03769 Vian-Chr1 60624899 60628686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03769 186 337 Core Cell Cycle Gene Families AT5G10270 45.963 5.09e-39 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Vian1g03769 Pkinase 8.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g03769 K08819 - gmx:100789359 645.195